PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID HL.SW.v1.0.G003203.1
Organism
Humulus lupulus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
Family bZIP
Protein Properties Length: 299aa    MW: 32333.9 Da    PI: 10.0673
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
HL.SW.v1.0.G003203.1genomeHOPBASEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_143.56.7e-14222270447
                           XCHHHCHHHHHHHHHHHHHHHHH.....HHHHHHHHHHHHHHHHHHHHH CS
                bZIP_1   4 lkrerrkqkNReAArrsRqRKka.....eieeLeekvkeLeaeNkaLkk 47 
                           ++r +r++kNRe+A rsR+RK+a     ++ eLe  v++L++eN++L+ 
  HL.SW.v1.0.G003203.1 222 DRRHKRMIKNRESAARSRARKQAsmlfaYTNELELVVAQLSEENERLRR 270
                           689*******************733333679**************9993 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003388.2E-8219287IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.8E-11222270No hitNo description
PfamPF001704.2E-10223270IPR004827Basic-leucine zipper domain
SuperFamilySSF579599.38E-8223275No hitNo description
CDDcd147071.30E-22223279No hitNo description
PROSITE patternPS000360226241IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009911Biological Processpositive regulation of flower development
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:2000028Biological Processregulation of photoperiodism, flowering
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0043621Molecular Functionprotein self-association
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    Send to blast
MSSSSGAEEI EISNTSTTSQ TRRSNSLQRV SSSSSSKKSF SSSTSSRTSS TAPSTSANTT  60
STRAMEEVWK DLNLTSLSET TNTITVPPLS NHPSTAANYR NMIYQDFLAR PFCTDRPPTT  120
MVTAPALAPA PAPSPESPLF GSPLPQPVTA LSLNSGPEFP FLDGSLTDPL RPNSHPLQPG  180
NPISNVSSFA SPFESLDSSS SLLNSFGKKR CQADDNGSAS GDRRHKRMIK NRESAARSRA  240
RKQASMLFAY TNELELVVAQ LSEENERLRR LQTQITEVPV ADQLPKKRTL QRTFTAPF*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018829596.11e-69PREDICTED: protein FD isoform X2
TrEMBLA0A2P5BXJ01e-77A0A2P5BXJ0_PARAD; Basic-leucine zipper transcription factor
STRINGEOX907802e-59(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF37553252
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35900.19e-30bZIP family protein