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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
HL.SW.v1.0.G002524.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
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Family |
HD-ZIP |
Protein Properties |
Length: 196aa MW: 22618.9 Da PI: 5.0657 |
Description |
HD-ZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
HL.SW.v1.0.G002524.1 | genome | HOPBASE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 64.7 | 1.3e-20 | 12 | 64 | 4 | 56 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
+ +f++eql+ Le +F++++ p +++++LAk+lgL+ rqV +WFqNrRa+ +
HL.SW.v1.0.G002524.1 12 KKRFSDEQLKSLEGMFQSDSRPEPRTKQKLAKELGLQPRQVAIWFQNRRARSR 64
678************************************************98 PP
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2 | HD-ZIP_I/II | 114.4 | 6.9e-37 | 11 | 102 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90
+k+r+s+eq+k+LE +F+++++ ep+ K++la+eLglqprqva+WFqnrRAR +tkq+E++y+ Lk +y +l+++ e+L++e++eL+++
HL.SW.v1.0.G002524.1 11 NKKRFSDEQLKSLEGMFQSDSRPEPRTKQKLAKELGLQPRQVAIWFQNRRARSRTKQIEREYNILKGSYSNLVSSFESLKRENQELNNQ 99
79*************************************************************************************** PP
HD-ZIP_I/II 91 lke 93
l+e
HL.SW.v1.0.G002524.1 100 LQE 102
987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 196 aa
Download sequence Send
to blast |
MKNTMTCREN NKKRFSDEQL KSLEGMFQSD SRPEPRTKQK LAKELGLQPR QVAIWFQNRR 60 ARSRTKQIER EYNILKGSYS NLVSSFESLK RENQELNNQL QEVTTLLGKD EGSGELESDH 120 TEKGIEASFE SKDLKSFKKI VEVHHGDDSN SRDVESVGKE TEVLDLASSI DDWSCFESGH 180 YVDEPNCSSW WEFWS*
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription activator that may act as growth regulators in response to water deficit. {ECO:0000269|PubMed:15604708, ECO:0000269|PubMed:8771791}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By water deficit, by abscisic acid (ABA) and by salt stress. {ECO:0000269|PubMed:16055682, ECO:0000269|PubMed:8771791}. |