PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus

Family

BES1

Protein Properties

Length: 616aa MW: 69830.5 Da PI: 5.894

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
HL.SW.v1.0.G002424.1	genome	HOPBASE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	135.3	6.3e-42	66	139	2	75
DUF822 2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskp 75 ++g+++++kE+E++k+RER+RRai+++++aGLR++Gn++lp+raD+n+Vl+AL+reAGwvve DGttyr++ p HL.SW.v1.0.G002424.1 66 AKGKREREKEKERTKLRERHRRAITSRMLAGLRQYGNFPLPARADMNDVLAALAREAGWVVETDGTTYRHSPPP 139 6899*****************************************************************66544 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	5.4E-41	67	141	IPR008540	BES1/BZR1 plant transcription factor, N-terminal
SuperFamily	SSF51445	1.46E-151	176	609	IPR017853	Glycoside hydrolase superfamily
Gene3D	G3DSA:3.20.20.80	3.5E-164	179	608	IPR013781	Glycoside hydrolase, catalytic domain
Pfam	PF01373	4.0E-80	185	573	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00750	8.4E-54	216	230	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00750	8.4E-54	237	255	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00750	8.4E-54	259	280	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00750	8.4E-54	352	374	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00750	8.4E-54	425	444	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00750	8.4E-54	459	475	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00750	8.4E-54	476	487	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00750	8.4E-54	494	517	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00750	8.4E-54	532	554	IPR001554	Glycoside hydrolase, family 14

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0000272	Biological Process	polysaccharide catabolic process
GO:0016161	Molecular Function	beta-amylase activity

Sequence ? help Back to Top
Protein Sequence Length: 616 aa Download sequence Send to blast
MNDNLDPQSD HSSDYLSHFQ PQTQAQTPTQ PRRPRGFAAT AAAAAAMTNT SGAVPSTAAA 60 ASTAPAKGKR EREKEKERTK LRERHRRAIT SRMLAGLRQY GNFPLPARAD MNDVLAALAR 120 EAGWVVETDG TTYRHSPPPS QLVHTLFPSL LYNFEFIAQL LQLIQDFRST NNGNDFTGTP 180 YVPVYVMLAT STVNQFCQLL DPEGVRQELS HLQSLNVDGI VVECWWGIIE GWSPQKYIWS 240 GYRDLFNIIR EFKLKLQVVV AFHEFGGSES GDTMITLPRW VLEIGKENQD IFFTDREGRR 300 NTECLSWGID KERVLQGRTG IEVYFDLMRS FRTEFDDLFA EGMICAVEIG LGASGELKYP 360 SFSERMGWRY PGVGEFQCFD KYLQQSLRKA AKLRGHSFWA RGPDNAGHYN SRPHETGFFC 420 ERGDYDSYYG RFFLQWYGQL LIDHADNVLS LASLAFEETN IIVKVPEVYW WYRTPSHAAE 480 LTSGYYNPTN QDGYSPVFEV LKKYSVTVKF VCSGLQMSSQ DIDEAFADPE GLSWQVFNSA 540 WDRGLAIAGE NALTCHREGH VKLVEMAKPR NDPDRRQFSF FVYRQPSLVQ GTMCFSELDD 600 LIKSMHGEIV GDLVS*

Sequence ? help Back to Top

Protein Sequence Length: 616 aa Download sequence Send to blast

MNDNLDPQSD HSSDYLSHFQ PQTQAQTPTQ PRRPRGFAAT AAAAAAMTNT SGAVPSTAAA  60
ASTAPAKGKR EREKEKERTK LRERHRRAIT SRMLAGLRQY GNFPLPARAD MNDVLAALAR  120
EAGWVVETDG TTYRHSPPPS QLVHTLFPSL LYNFEFIAQL LQLIQDFRST NNGNDFTGTP  180
YVPVYVMLAT STVNQFCQLL DPEGVRQELS HLQSLNVDGI VVECWWGIIE GWSPQKYIWS  240
GYRDLFNIIR EFKLKLQVVV AFHEFGGSES GDTMITLPRW VLEIGKENQD IFFTDREGRR  300
NTECLSWGID KERVLQGRTG IEVYFDLMRS FRTEFDDLFA EGMICAVEIG LGASGELKYP  360
SFSERMGWRY PGVGEFQCFD KYLQQSLRKA AKLRGHSFWA RGPDNAGHYN SRPHETGFFC  420
ERGDYDSYYG RFFLQWYGQL LIDHADNVLS LASLAFEETN IIVKVPEVYW WYRTPSHAAE  480
LTSGYYNPTN QDGYSPVFEV LKKYSVTVKF VCSGLQMSSQ DIDEAFADPE GLSWQVFNSA  540
WDRGLAIAGE NALTCHREGH VKLVEMAKPR NDPDRRQFSF FVYRQPSLVQ GTMCFSELDD  600
LIKSMHGEIV GDLVS*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1wdq_A	1e-115	181	553	11	383	Beta-amylase
Search in ModeBase

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_023543491.1	0.0	beta-amylase 8-like isoform X2
Swissprot	Q9FH80	0.0	BAM8_ARATH; Beta-amylase 8
TrEMBL	A0A0K0PUA9	0.0	A0A0K0PUA9_CAMSI; Beta-amylase
STRING	XP_004164169.1	0.0	(Cucumis sativus)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF11902	30	32

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45300.1	0.0	beta-amylase 2

Publications ? help Back to Top
Soyk S, et al. The Enzyme-Like Domain of Arabidopsis Nuclear β-Amylases Is Critical for DNA Sequence Recognition and Transcriptional Activation. Plant Cell, 2014. 26(4): p. 1746-1763 [PMID:24748042]