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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
HL.SW.v1.0.G002087.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
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Family |
NAC |
Protein Properties |
Length: 338aa MW: 39522.3 Da PI: 8.6645 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
HL.SW.v1.0.G002087.1 | genome | HOPBASE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 102.6 | 5.2e-32 | 16 | 134 | 5 | 127 |
NAM 5 frFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90
f+F+Pt+eel+ +L+ k+ gk+ +l++ i+ev +i+k++Pw+Lp+ k+ ++++ew+f ++ d k+++++r+nr+tk+gyWk+tgk+
HL.SW.v1.0.G002087.1 16 FKFKPTEEELI-THLNLKTLGKESDLDSYIAEVdHICKWQPWELPHfsKI-ESKTEWWFLCRPDYKNNHSNRSNRTTKTGYWKKTGKEC 102
9**********.89************889****66**********52244.3567********************************66 PP
NAM 91 evlskkgelvglkktLvfykgrapkgektdWvmheyr 127
+ + g k++Lvf++g+ ++g++tdWv+hey
HL.SW.v1.0.G002087.1 103 NTKG----CDGRKRILVFHDGS-SSGKRTDWVLHEYY 134
5544....679********765.5789********95 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 338 aa
Download sequence Send
to blast |
MSDYVPVWVR PPCPFFKFKP TEEELITHLN LKTLGKESDL DSYIAEVDHI CKWQPWELPH 60 FSKIESKTEW WFLCRPDYKN NHSNRSNRTT KTGYWKKTGK ECNTKGCDGR KRILVFHDGS 120 SSGKRTDWVL HEYYSLQPNV AFSLQKPDYV ICRLKRKQQE KGQNECEMAS DLGNPLVSTT 180 TTMVNNVISS PQQQLCSPEL CNTEALPDED IWALIDMPEF SWNELEKCLV SAEITYNSSN 240 MRDPSMSLHD GPLSSNTQAV EINEPYIQTW RAEVHLVRFL AQRKSRVSEW FRHQVKLYII 300 LWIKIPYKKQ LFPLFIRVSK WMLLLLAKRH SKRSSAV*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 7e-20 | 14 | 158 | 19 | 166 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 7e-20 | 14 | 158 | 19 | 166 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 7e-20 | 14 | 158 | 19 | 166 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 7e-20 | 14 | 158 | 19 | 166 | NO APICAL MERISTEM PROTEIN |
3swm_A | 6e-20 | 14 | 158 | 22 | 169 | NAC domain-containing protein 19 |
3swm_B | 6e-20 | 14 | 158 | 22 | 169 | NAC domain-containing protein 19 |
3swm_C | 6e-20 | 14 | 158 | 22 | 169 | NAC domain-containing protein 19 |
3swm_D | 6e-20 | 14 | 158 | 22 | 169 | NAC domain-containing protein 19 |
3swp_A | 6e-20 | 14 | 158 | 22 | 169 | NAC domain-containing protein 19 |
3swp_B | 6e-20 | 14 | 158 | 22 | 169 | NAC domain-containing protein 19 |
3swp_C | 6e-20 | 14 | 158 | 22 | 169 | NAC domain-containing protein 19 |
3swp_D | 6e-20 | 14 | 158 | 22 | 169 | NAC domain-containing protein 19 |
4dul_A | 7e-20 | 14 | 158 | 19 | 166 | NAC domain-containing protein 19 |
4dul_B | 7e-20 | 14 | 158 | 19 | 166 | NAC domain-containing protein 19 |