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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
HL.SW.v1.0.G001553.1 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
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| Family |
HD-ZIP |
| Protein Properties |
Length: 188aa MW: 21315 Da PI: 9.099 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| HL.SW.v1.0.G001553.1 | genome | HOPBASE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 57.3 | 2.7e-18 | 28 | 81 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
r+R ++t+ q++ Le+ F ++++++ e++ +LA+klgL+ rqV +W+qNrRa++k
HL.SW.v1.0.G001553.1 28 RTR-RLTQAQVRLLETSFTSDHKLQSERKLHLAAKLGLSPRQVAIWYQNRRARHK 81
444.89***********************************************99 PP
|
| 2 | HD-ZIP_I/II | 102.6 | 3.4e-33 | 28 | 119 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90
+ rrl++ qv+lLE+sF++++kL++erK +la +Lgl+prqva+W+qnrRAR+kt+ +E dy++++ ++d + +e++rLe+ev L++e
HL.SW.v1.0.G001553.1 28 RTRRLTQAQVRLLETSFTSDHKLQSERKLHLAAKLGLSPRQVAIWYQNRRARHKTQTVEFDYRSIQLKLDDVLAEKKRLEREVGMLKHE 116
789************************************************************************************99 PP
HD-ZIP_I/II 91 lke 93
l++
HL.SW.v1.0.G001553.1 117 LNR 119
975 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 188 aa
Download sequence Send
to blast |
MDFQCLDILT DETKQNQDLS KPLTQQRRTR RLTQAQVRLL ETSFTSDHKL QSERKLHLAA 60
KLGLSPRQVA IWYQNRRARH KTQTVEFDYR SIQLKLDDVL AEKKRLEREV GMLKHELNRA 120
REMLLRASGN DGGGRSSPDA SLPSVISTSG VDDHGSSSSL QNYYTFGTEN VAELPVGELY 180
TCLSPWP*
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