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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
HL.SW.v1.0.G001421.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
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Family |
TALE |
Protein Properties |
Length: 519aa MW: 58157.6 Da PI: 6.3806 |
Description |
TALE family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
HL.SW.v1.0.G001421.1 | genome | HOPBASE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 25.8 | 1.8e-08 | 439 | 477 | 18 | 54 |
HHHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
Homeobox 18 lFek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54
+F++ ++yp+ +e+ LA k gLt +qV++WF N R +
HL.SW.v1.0.G001421.1 439 MFQNflHPYPKDAEKHLLAVKSGLTRNQVSNWFINARVR 477
5887779******************************88 PP
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2 | BELL | 76.1 | 5.2e-25 | 309 | 376 | 2 | 70 |
BELL 2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiae 70
r++ + k+akLlsll+ Vd+rY+q+ ++++tv+s+F+a+++l++ ++++++Al++iS ++ L+++i++
HL.SW.v1.0.G001421.1 309 RRQFETKRAKLLSLLQLVDDRYNQCLDEIHTVVSAFHAATELDP-QMHARFALQTISVLYKGLRERISK 376
678899**************************************.**********************86 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0008285 | Biological Process | negative regulation of cell proliferation |
GO:0009640 | Biological Process | photomorphogenesis |
GO:0010073 | Biological Process | meristem maintenance |
GO:0010227 | Biological Process | floral organ abscission |
GO:0010228 | Biological Process | vegetative to reproductive phase transition of meristem |
GO:0010371 | Biological Process | regulation of gibberellin biosynthetic process |
GO:0090470 | Biological Process | shoot organ boundary specification |
GO:0005634 | Cellular Component | nucleus |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 519 aa
Download sequence Send
to blast |
MENNQAFNIT QEMIMTSRND LTAMNSSFVL QSYLDDFSYS NPLFYSYKRS FSRDEASSLG 60 GVGSSSSAMC TSTELQEEAA KFMAAKAAAA AGHGLQENLN NLAISVPQMY SSDDVISGFV 120 SNENNNNSYV TYNNQWGDVE LVGKTSEFHQ TFDPNVWNSN NNHNGSSDFS NELSLSLATS 180 QPSVITGMAT TIPGQCSDMS RSAALPARNT ETVLVSEQTS CNNNNKVLSP SFGSYRPLQL 240 SQVILGSRYL SAAQEILAHF ASFSLENIGH DHSSSSYLMN SCSLSTMSPM DSTSDGGRLE 300 GETESESHRR QFETKRAKLL SLLQLVDDRY NQCLDEIHTV VSAFHAATEL DPQMHARFAL 360 QTISVLYKGL RERISKYCLA MGATSFDQLG RESSGSDKSF ETSFIQKQWA LQQLKKKDQL 420 WRPQRGLPER SVSVLRAWMF QNFLHPYPKD AEKHLLAVKS GLTRNQVSNW FINARVRLWK 480 PMIEEMYAEL NRRKENNNQR ISINDNNNNN INQIQRYN*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor which may be involved in the signal transduction pathway downstream of the COP1 gene. Controls floral competency as a specific activator of FLC expression. Is responsive of the nuclear import of SHOOT MERISTEMLESS (STM). {ECO:0000269|PubMed:17908157}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By light. In etiolated seedlings, maximally expressed after 3 days of illumination. |