 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
HL.SW.v1.0.G000560.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
|
| Family |
WRKY |
| Protein Properties |
Length: 244aa MW: 27884.5 Da PI: 5.0908 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| HL.SW.v1.0.G000560.1 | genome | HOPBASE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 66.4 | 4.4e-21 | 42 | 96 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
+DgynWrKY + ++ e+ r Y++Ct+++C+vkkkv+ s+ d+++++i+Yeg+Hnh
HL.SW.v1.0.G000560.1 42 EDGYNWRKYA--VYNNGENRRLYFKCTHPNCKVKKKVDNSH-DGQITDIIYEGDHNHA 96
8********6..56788999********************9.***************6 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 244 aa
Download sequence Send
to blast |
MAYNQSPDLS RKLIYEEYNT SIDVSERNHF EYYSSIRERI LEDGYNWRKY AVYNNGENRR 60
LYFKCTHPNC KVKKKVDNSH DGQITDIIYE GDHNHAEPQL GEDPEAKRRK NLNSTSSLSS 120
RSVGEPKIVI QIKTDEDILD DVKKHVERDS GNLIIKYEGK HNHEVPELDS ASVPTANNPE 180
QYSQQTDVEE DEAVFLGGGY NWREYGESYY KCSHPNRSCG LELSDPLSSA HGLGSSAFSL 240
GEVP
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Functions with WRKY25 and WRKY33 as positive regulator of plant thermotolerance by partially participating in ethylene-response signal transduction pathway (PubMed:21336597). {ECO:0000250|UniProtKB:Q9SI37, ECO:0000269|PubMed:21336597}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By salicylic acid (PubMed:11449049). Induced by heat stress (PubMed:21336597). {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:21336597}. |
