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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Gorai.013G114900.1 |
Common Name | B456_013G114900, LOC105783950 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family |
MYB |
Protein Properties |
Length: 277aa MW: 31025.6 Da PI: 6.3462 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Gorai.013G114900.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 53.5 | 5.4e-17 | 26 | 73 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT+eEde l++++k Ggg+W+t +++ g+ R++k+c++rw +yl
Gorai.013G114900.1 26 KGPWTAEEDEVLANYIKIEGGGRWRTLPKRAGLLRCGKSCRLRWMNYL 73
79******************************99************97 PP
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2 | Myb_DNA-binding | 47.6 | 3.9e-15 | 79 | 124 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg+ ++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++l
Gorai.013G114900.1 79 RGPIAPDEEDLILRLHRLLGNR-WALIAGRIP-GRTDNEIKNYWNTHL 124
566679****************.*********.************996 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 277 aa
Download sequence Send
to blast |
MKKPILLGTS TATSRTPCCS KVGIKKGPWT AEEDEVLANY IKIEGGGRWR TLPKRAGLLR 60 CGKSCRLRWM NYLRPTVKRG PIAPDEEDLI LRLHRLLGNR WALIAGRIPG RTDNEIKNYW 120 NTHLSKNLIS QGIDPRTHKP LSPVSHGSSQ ANQDDDDDVP ESNPNPPSSF KSSELMGEKT 180 NSMETTNLES HQIYQHQQEV GDDCMGQPSS SGNGGDLVEN GNEDHMFSLF LDSLITDNQQ 240 QQQQSNNGEL WEAEIMSPMV EFGNPQNYFN HHQQHP*
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Siliques. {ECO:0000269|PubMed:9839469}. |
Functional Description ? help
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Source |
Description |
UniProt | Transcription activator, when associated with BHLH002/EGL3/MYC146, BHLH012/MYC1 or BHLH042/TT8. {ECO:0000269|PubMed:15361138}. |