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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Gorai.012G169300.1 |
Common Name | B456_012G169300, LOC105779156 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family |
NAC |
Protein Properties |
Length: 133aa MW: 14868.2 Da PI: 10.6497 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Gorai.012G169300.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 120.9 | 1.1e-37 | 8 | 129 | 1 | 115 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91
lp GfrFhPtdeel+ +yL kk++++++++ ++i++vdiyk++PwdLp k+ +ekew fFs+rd+ky++g r+n at+sg+Wkatg k
Gorai.012G169300.1 8 LPLGFRFHPTDEELILHYLMKKLTSSPFPV-SIIADVDIYKFDPWDLPDKAVLGEKEWNFFSPRDRKYPNGARPNGATSSGFWKATGIVKI 97
699***************************.89***************7777899***********************************9 PP
NAM 92 vlsk..kgel........vglkktLvfykgrapk 115
++++ + +g+kk Lvf++ ++p+
Gorai.012G169300.1 98 IVASsmA--AgrggvhfnIGVKKALVFHRRNKPS 129
9997550..345566778**********988876 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 133 aa
Download sequence Send
to blast |
MRHPHSSLPL GFRFHPTDEE LILHYLMKKL TSSPFPVSII ADVDIYKFDP WDLPDKAVLG 60 EKEWNFFSPR DRKYPNGARP NGATSSGFWK ATGIVKIIVA SSMAAGRGGV HFNIGVKKAL 120 VFHRRNKPST HL*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 4e-44 | 7 | 123 | 16 | 123 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 4e-44 | 7 | 123 | 16 | 123 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 4e-44 | 7 | 123 | 16 | 123 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 4e-44 | 7 | 123 | 16 | 123 | NO APICAL MERISTEM PROTEIN |
3swm_A | 4e-44 | 7 | 123 | 19 | 126 | NAC domain-containing protein 19 |
3swm_B | 4e-44 | 7 | 123 | 19 | 126 | NAC domain-containing protein 19 |
3swm_C | 4e-44 | 7 | 123 | 19 | 126 | NAC domain-containing protein 19 |
3swm_D | 4e-44 | 7 | 123 | 19 | 126 | NAC domain-containing protein 19 |
3swp_A | 4e-44 | 7 | 123 | 19 | 126 | NAC domain-containing protein 19 |
3swp_B | 4e-44 | 7 | 123 | 19 | 126 | NAC domain-containing protein 19 |
3swp_C | 4e-44 | 7 | 123 | 19 | 126 | NAC domain-containing protein 19 |
3swp_D | 4e-44 | 7 | 123 | 19 | 126 | NAC domain-containing protein 19 |
4dul_A | 4e-44 | 7 | 123 | 16 | 123 | NAC domain-containing protein 19 |
4dul_B | 4e-44 | 7 | 123 | 16 | 123 | NAC domain-containing protein 19 |
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that binds to the promoter of ACO5, an ACC oxidase involved in ethylene biosynthesis. Mediates waterlogging-induced hyponastic leaf movement, and cell expansion in abaxial cells of the basal petiole region, by directly regulating the expression of ACO5 (PubMed:24363315). Required for normal seed development and morphology (PubMed:18849494). {ECO:0000269|PubMed:18849494, ECO:0000269|PubMed:24363315}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By root flooding (PubMed:24363315). Induced by senescence (PubMed:24659488). {ECO:0000269|PubMed:24363315, ECO:0000269|PubMed:24659488}. |