 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Gorai.011G142100.2 |
| Common Name | B456_011G142100, LOC105777223 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
|
| Family |
FAR1 |
| Protein Properties |
Length: 248aa MW: 28641.2 Da PI: 6.5184 |
| Description |
FAR1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Gorai.011G142100.2 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | FAR1 | 84.4 | 1.9e-26 | 77 | 167 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerr..traetrtgCkaklkvkkekdgkwevtkleleHnHel 89
+fY eYA+++GFs+r+++ ++s +n i+ r+fvCs+eg+r+ ++ +++ r +r++tr gCka++++ ++ gkw+vtk+++eH+H+l
Gorai.011G142100.2 77 DFYFEYARRTGFSIRTNRIRHSLKNMAIIGRDFVCSREGFRAAKHAHRK-DRVlpPRPVTREGCKAMIRLAARDGGKWVVTKFVHEHSHKL 166
6*****************************************9998832.222459**********************************9 PP
FAR1 90 a 90
+
Gorai.011G142100.2 167 M 167
6 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 248 aa
Download sequence Send
to blast |
MAGTAGPHEF SDTDRSSEDE TAVNMAKYEG IRQELLQEQN IMDNEFISSE QANEAFGLGN 60
LEPYTGMTFQ SLDDARDFYF EYARRTGFSI RTNRIRHSLK NMAIIGRDFV CSREGFRAAK 120
HAHRKDRVLP PRPVTREGCK AMIRLAARDG GKWVVTKFVH EHSHKLMDRK FPGELPTVNM 180
LSEEEKDKKI QDLYNELHRE RARSATFQQQ LHMILKDLEE HAEFMSIRVE DIVDSLKRVE 240
LNDSSFN*
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | JX622788 | 2e-56 | JX622788.1 Gossypium hirsutum clone NBRI_GE69666 microsatellite sequence. |
