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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Gorai.011G050400.7 |
| Common Name | B456_011G050400 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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| Family |
Trihelix |
| Protein Properties |
Length: 273aa MW: 30962.4 Da PI: 8.5783 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Gorai.011G050400.7 | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 51.3 | 3e-16 | 23 | 118 | 2 | 86 |
trihelix 2 WtkqevlaLiearr.emeerlrrg........klkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr..tsessstcpy 81
Wt +e+++Liea++ + e+r++r+ k + +W++v ++++ +g+ rs++qC++kw+nl ++ykk++e ++k ++++ s+ +
Gorai.011G050400.7 23 WTVNETMVLIEAKEmDYERRMKRSgdhsegrnKPTELRWKWVEDYCWGKGCLRSQNQCNDKWDNLMRDYKKVREYQRKVaeREGNDSKQRS 113
*************963333333322222222268899**************************************9998433556667777 PP
trihelix 82 fdqle 86
+ ++e
Gorai.011G050400.7 114 YWEME 118
77776 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 273 aa
Download sequence Send
to blast |
MHLMMDDQGG NNAVTREYRK GNWTVNETMV LIEAKEMDYE RRMKRSGDHS EGRNKPTELR 60
WKWVEDYCWG KGCLRSQNQC NDKWDNLMRD YKKVREYQRK VAEREGNDSK QRSYWEMEKN 120
ERKEKSLPSN MLRQIYERLE EVVEKKGAQT VAATAGGGGG SDPNITNLPY VMDRPMVSTF 180
QPSLPPLLQH QLSAPIPAAI PLPLPQASPQ LPPPPAPIIQ PPPLSYAQPL PTIGRCVMIA 240
QILIQVSIQT HQQREGEEVV AMAKAPVGLQ TT*
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