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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Gorai.011G029300.1 |
Common Name | B456_011G029300, LOC105777919 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family |
Dof |
Protein Properties |
Length: 291aa MW: 31463.2 Da PI: 9.0465 |
Description |
Dof family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Gorai.011G029300.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-Dof | 125.8 | 1.3e-39 | 37 | 97 | 2 | 62 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
+++alkcprCds+ntkfCyynnyslsqPr+fCkaC+ryWt+GG+lrnvPvGgg+rknk+++
Gorai.011G029300.1 37 QQQALKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRVK 97
7899******************************************************976 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 291 aa
Download sequence Send
to blast |
MLRNCEKMVA VITSSATNEW PQKLMEKPSQ EQQQVQQQQA LKCPRCDSSN TKFCYYNNYS 60 LSQPRHFCKA CKRYWTRGGT LRNVPVGGGC RKNKRVKRPT VSASTPPSIG GASPTSGGGG 120 GVNHNSTTSS HHINPLFYGL TANDPYHDVI NLPFSRSSTV TGYDLQPQMS GLGLGFSSGD 180 NTDHYPPLLS SYTNIFGSSS SSSTTTTTPT IASLLASTLN QHKFINGGVK NTEALPPFPD 240 LQTAAMKDIK VPCQNHLEQI TSLDPSLYWS TNIGAWHDPT NIGSSVTSLI *
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | EU532295 | 0.0 | EU532295.1 Gossypium barbadense clone I10-23 ISSR marker genomic sequence. |