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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Gorai.010G232200.1 |
Common Name | B456_010G232200, LOC105772161 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family |
LBD |
Protein Properties |
Length: 156aa MW: 17821.6 Da PI: 8.1538 |
Description |
LBD family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Gorai.010G232200.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF260 | 116 | 2.3e-36 | 16 | 111 | 2 | 96 |
DUF260 2 CaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkal.peeeredamsslvyeAearardPvyGavgvilklqqqleqlk 91
C aCk++rr+C++dC +ap fp++++++f+n+hklFG++nv+kl+++l +++++++am+++v e+++rardPv G++++i++lq+q+e+++
Gorai.010G232200.1 16 CLACKYQRRRCPADCSFAPNFPHDREQQFKNMHKLFGMANVIKLIRTLkDPSKKDIAMRTIVVESDMRARDPVGGCYRIIQELQHQIECKE 106
9***********************************************667779************************************* PP
DUF260 92 aelal 96
a+l++
Gorai.010G232200.1 107 AQLDK 111
*9986 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 156 aa
Download sequence Send
to blast |
MSISTSGNTT VATEDCLACK YQRRRCPADC SFAPNFPHDR EQQFKNMHKL FGMANVIKLI 60 RTLKDPSKKD IAMRTIVVES DMRARDPVGG CYRIIQELQH QIECKEAQLD KIYYTIANCR 120 AQNAHCLQLQ TQKIDDGDHC QMMHKLPLIG FETEK*
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