 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Gorai.010G159700.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
|
| Family |
G2-like |
| Protein Properties |
Length: 291aa MW: 33201.1 Da PI: 8.0726 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Gorai.010G159700.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 99.6 | 2.2e-31 | 97 | 150 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
prlrWtp+LH +Fv+ ve+LGG+++AtPk +l+lm+vkgL+++hvkSHLQ+YR+
Gorai.010G159700.1 97 PRLRWTPDLHLSFVHSVERLGGQDRATPKLVLQLMNVKGLSIAHVKSHLQMYRS 150
8****************************************************7 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 291 aa
Download sequence Send
to blast |
MIEGMVEKHD EEKRVDNEQA ENISAMSFPS QKCSSLDLNE EASSKEDYDY NIIGNGKQGD 60
EIEKTSEGNS SNNNNNIVGE KGNGRRRVRQ YVRSKLPRLR WTPDLHLSFV HSVERLGGQD 120
RATPKLVLQL MNVKGLSIAH VKSHLQMYRS KKRDEAGQVL CERTRAIKGR EELQSSPHLH 180
FRMENGGFVL ATESPLYQPP LDFEVSFPRH QVSNDVGHHT NQIHGVDARL GPMRTGRLLE 240
DKRWHPFERQ KHRDCLPDLQ LRRSRRSGID AETTTHCEVP QEISTHLSLS *
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4r_A | 7e-17 | 98 | 152 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 7e-17 | 98 | 152 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 7e-17 | 98 | 152 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 7e-17 | 98 | 152 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | JX596407 | 2e-37 | JX596407.1 Gossypium hirsutum clone NBRI_GE32984 microsatellite sequence. |
