PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Gorai.010G157200.2

Common Name

B456_010G157200

Organism

Gossypium raimondii

Taxonomic ID

29730

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium

Family

VOZ

Protein Properties

Length: 475aa MW: 52575.2 Da PI: 5.6583

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Gorai.010G157200.2	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	413.1	5.2e-127	202	416	1	215
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwn 91 p+psaflgpkcalwdc+rpaqg + d+cssfha+la+neg+pg+ pvlrp+gi+lkdgllfaalsak+qgk+vgipec+gaatakspwn Gorai.010G157200.2 202 PSPSAFLGPKCALWDCPRPAQGLGGCLDFCSSFHAALAMNEGPPGMGPVLRPGGIGLKDGLLFAALSAKTQGKDVGIPECQGAATAKSPWN 292 89*************************************************************************************** PP VOZ 92 aaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalal 182 a+elfdl +l+ge+irewlffdkprrafesgnrkqrslpdy+grgwhesrkqvm+efgglkrsyymdpqp+++fewhlyeyein++da+al Gorai.010G157200.2 293 APELFDLLVLDGESIREWLFFDKPRRAFESGNRKQRSLPDYNGRGWHESRKQVMNEFGGLKRSYYMDPQPLNHFEWHLYEYEINKCDACAL 383 *************************************************************************************** PP VOZ 183 yrlelklvdekksakgkvskdsladlqkklgrl 215 yrlelklvd+kksakgk +d+++ k++g+l Gorai.010G157200.2 384 YRLELKLVDGKKSAKGKPVNDTVSYPHKHMGKL 416 *****************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 475 aa Download sequence Send to blast
MGKGSKNNCK SASHKLFKDK AKNRVDDLQG MFLDLQFARK ESRGVDVAVL EEQLHQMLRE 60 WKAELNEPSP ASSLQQGGSL GSFSSDICRL LQLCEEEDDA TSILAVPKPE PNDQSLQVGD 120 TAASQEGQHE CGFPLVDQCK ESPSQVCTMS INSLEGATQL EYHQFDLDQD FEHFYTGYNG 180 TEFCREDDAM PRTYSYLPSI CPSPSAFLGP KCALWDCPRP AQGLGGCLDF CSSFHAALAM 240 NEGPPGMGPV LRPGGIGLKD GLLFAALSAK TQGKDVGIPE CQGAATAKSP WNAPELFDLL 300 VLDGESIREW LFFDKPRRAF ESGNRKQRSL PDYNGRGWHE SRKQVMNEFG GLKRSYYMDP 360 QPLNHFEWHL YEYEINKCDA CALYRLELKL VDGKKSAKGK PVNDTVSYPH KHMGKLPDGF 420 PSENKCCVKG RTKVNAKIGV GNFFSTPNAV VPTSEKFEYG PSVQYDYGGS YYLT*

Sequence ? help Back to Top

Protein Sequence Length: 475 aa Download sequence Send to blast

MGKGSKNNCK SASHKLFKDK AKNRVDDLQG MFLDLQFARK ESRGVDVAVL EEQLHQMLRE  60
WKAELNEPSP ASSLQQGGSL GSFSSDICRL LQLCEEEDDA TSILAVPKPE PNDQSLQVGD  120
TAASQEGQHE CGFPLVDQCK ESPSQVCTMS INSLEGATQL EYHQFDLDQD FEHFYTGYNG  180
TEFCREDDAM PRTYSYLPSI CPSPSAFLGP KCALWDCPRP AQGLGGCLDF CSSFHAALAM  240
NEGPPGMGPV LRPGGIGLKD GLLFAALSAK TQGKDVGIPE CQGAATAKSP WNAPELFDLL  300
VLDGESIREW LFFDKPRRAF ESGNRKQRSL PDYNGRGWHE SRKQVMNEFG GLKRSYYMDP  360
QPLNHFEWHL YEYEINKCDA CALYRLELKL VDGKKSAKGK PVNDTVSYPH KHMGKLPDGF  420
PSENKCCVKG RTKVNAKIGV GNFFSTPNAV VPTSEKFEYG PSVQYDYGGS YYLT*

Expression -- Description ? help Back to Top
Source	Description
Uniprot	TISSUE SPECIFICITY: Ubiquitous. Expressed in the vascular bundles of various tissues, specifically in the phloem. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012451500.1	0.0	PREDICTED: transcription factor VOZ1
Refseq	XP_012451501.1	0.0	PREDICTED: transcription factor VOZ1
Swissprot	Q9SGQ0	0.0	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	A0A0D2VAV8	0.0	A0A0D2VAV8_GOSRA; Uncharacterized protein
STRING	Gorai.010G157200.1	0.0	(Gossypium raimondii)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	0.0	vascular plant one zinc finger protein

Link Out ? help Back to Top
Phytozome	Gorai.010G157200.2

Publications ? help Back to Top
Paterson AH, et al. Repeated polyploidization of Gossypium genomes and the evolution of spinnable cotton fibres. Nature, 2012. 492(7429): p. 423-7 [PMID:23257886] Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]