PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Gorai.010G073600.2 | ||||||||
Common Name | B456_010G073600 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family | bHLH | ||||||||
Protein Properties | Length: 320aa MW: 35219.3 Da PI: 7.9304 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 12 | 0.0004 | 221 | 259 | 12 | 55 |
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 R +++ +++ L +l+ + +K + a++L +A+ YI+ Lq Gorai.010G073600.2 221 RKEKLGDRITALHQLVSPF-----GKTDTASVLLEAIGYIRFLQ 259 6677889999999999998.....8******************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 11.49 | 209 | 258 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 5.61E-6 | 219 | 263 | No hit | No description |
SuperFamily | SSF47459 | 6.15E-10 | 219 | 268 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 8.1E-8 | 223 | 269 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 320 aa Download sequence Send to blast |
MNRGVLQSSP LQQMTAGNLN WWNINSTMRP PPTTHLQPPS HFLPPSPPTL FPQFTPTPTS 60 SSSSSWNDNN QELPQSWSQL LFCGLMGEEE KGGIGQFQVQ PKKLENWEEQ ALQQTSNAIS 120 AVDVKQENPN NYVYGHANED FHHQASKPAW SHQIMATSSA LSPKSGVTSF SSKMLEFSGN 180 KADARQPHPD RSSECNSSAS GGAWKKARVQ PSATQSTFKV RKEKLGDRIT ALHQLVSPFG 240 KTDTASVLLE AIGYIRFLQS QIELLNENSM KRKGGPDRQK ECDEEPKKDL RSRGLCLVPV 300 SCTLQVGSDN GADYWAPAL* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012451395.1 | 0.0 | PREDICTED: transcription factor bHLH68-like isoform X1 | ||||
Swissprot | Q8S3D1 | 2e-80 | BH068_ARATH; Transcription factor bHLH68 | ||||
TrEMBL | A0A0D2R3K7 | 0.0 | A0A0D2R3K7_GOSRA; Uncharacterized protein | ||||
STRING | Gorai.010G073600.1 | 0.0 | (Gossypium raimondii) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G29100.1 | 2e-73 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Gorai.010G073600.2 |
Publications ? help Back to Top | |||
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