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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Gorai.010G033400.1 |
Common Name | B456_010G033400 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family |
GATA |
Protein Properties |
Length: 361aa MW: 39488.6 Da PI: 4.4598 |
Description |
GATA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Gorai.010G033400.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GATA | 49.7 | 5e-16 | 208 | 244 | 1 | 35 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35
C++Cg+++ Tp +Rrgp g++tLCnaCGl+++ kg+
Gorai.010G033400.1 208 CQHCGVSEnnTPAMRRGPAGPRTLCNACGLMWANKGT 244
*******99*************************997 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0005515 | Molecular Function | protein binding |
GO:0008270 | Molecular Function | zinc ion binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 361 aa
Download sequence Send
to blast |
MAAANPQPLQ TRPFVDHARG TIQIEDDDGD YEDDAMDDVE DANANSVNVA EHGTGVVGGV 60 NDGGGVVMAS RTSELTLSFE GEVYVFPAVT PEKVQAVLLL LGGREIPTDV PTIEVPFDQN 120 NRGVGDLPKR SNLSRRIASL VRFREKRKER CFDKKIRYTV RKEVAQRMHR KNGQFASLKE 180 STSTSSWDSS QTDLQDGTPR PKTVVRRCQH CGVSENNTPA MRRGPAGPRT LCNACGLMWA 240 NKGTLRDLSK GGRSISMDQN EPETTIDVKP SIMEGNFPGN QDEHGNPLKD VTDGSNNASV 300 NPDEEDLHEN AEDLKNSLPV GIVHPAADDD EQEVEYFFLE PLVELANPSD TEIDIPSSFD 360 *
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Predominantly expressed in shoot apices, inflorescences and roots. {ECO:0000269|PubMed:14966217}. |
Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. {ECO:0000250, ECO:0000269|PubMed:14966217}. |