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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Gorai.008G068100.1 |
Common Name | B456_008G068100, LOC105763284 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family |
GRAS |
Protein Properties |
Length: 615aa MW: 67688.3 Da PI: 5.1825 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Gorai.008G068100.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 369.4 | 4.9e-113 | 247 | 614 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilk 92
++Ll+cA+ +s+++ e+a + L +l+e +s++gdp++R+a+yft+AL +r++ k l+ et+ s++ + ++k++++++P+ k
Gorai.008G068100.1 247 LKALLDCAR-LSDSEPERAIKSLVELRESVSERGDPTERVAFYFTQALYSRVSL---PAEKRLNLLETT---SEDFTLSYKVLNDACPYSK 330
689*****9.677799999999*******************************9...677788888888...89999************** PP
GRAS 93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg..skeeleetgerLakfAeelgvpfefnv 180
f+hltaNqaIlea+e+++++Hi+Df+i qG+QW+aLlqaLa+R++g+p ++Ri g+ +p g + +l +tg+rL++fA+ l+++fef++
Gorai.008G068100.1 331 FAHLTANQAILEATERATKIHIVDFGIVQGVQWAALLQALAARSAGKPtRIRISGIPAPVLGssPAPSLYATGNRLRDFAKLLDLNFEFEP 421
********************************************77666*********998888999************************ PP
GRAS 181 lvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsl 271
+ + +++l+ + +rv+++E+laVn++lql++lld + + + + L l ksl+Pk+v++ e ea++n+ F++rf +al+yy+a+f+sl
Gorai.008G068100.1 422 -ILTPIKELKESCFRVDNDEVLAVNFMLQLYNLLDATPVTVE---AALCLAKSLNPKIVTLGEYEASLNRVGFVNRFKNALRYYTAVFESL 508
.799******************************88777777...9********************************************* PP
GRAS 272 eaklpreseerikvErellgreivnvvacegae.rrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslv. 359
e +lpr+s er+ vEr+llg +i ++ +e+ae rrer+e +e+W+ +e+aGF++v+ls++a +qak ll +++ s y++ e++ ++
Gorai.008G068100.1 509 EPNLPRDSPERVEVERQLLGGKIGAIIGAEEAEkRRERMEDKEQWKVLMESAGFETVSLSHYAISQAKILLWNYNySSSYSLIESKPGFLt 599
***************************9999888*****************************************9999998877666555 PP
GRAS 360 lgWkdrpLvsvSaWr 374
l Wk+ pL++vS+Wr
Gorai.008G068100.1 600 LAWKEVPLLTVSSWR 614
**************8 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
Protein Sequence Length: 615 aa
Download sequence Send
to blast |
MAYMCADSGN LMAIAQQVIK QQQQQEQQQE QHHHQQQQLL GVSHVTLNPW PNNPHHGVSN 60 SPILGYGLSG PGFTDLFQGD TGEGFQFPNM GHHHSSGFRF PDFGGGSGGE FDTDEWMDCL 120 MNSGDSTDSS NLPSGCEVWQ NNADFGLYGA DPFSACPNRL SVACPTPSDL NRVIFPTEAQ 180 KNLSPTLQPQ HQLPTWSPSP SPPPPPPPHV AVKETKASSP PSQTPLTNDA TGVSADSTKI 240 ESAPPLLKAL LDCARLSDSE PERAIKSLVE LRESVSERGD PTERVAFYFT QALYSRVSLP 300 AEKRLNLLET TSEDFTLSYK VLNDACPYSK FAHLTANQAI LEATERATKI HIVDFGIVQG 360 VQWAALLQAL AARSAGKPTR IRISGIPAPV LGSSPAPSLY ATGNRLRDFA KLLDLNFEFE 420 PILTPIKELK ESCFRVDNDE VLAVNFMLQL YNLLDATPVT VEAALCLAKS LNPKIVTLGE 480 YEASLNRVGF VNRFKNALRY YTAVFESLEP NLPRDSPERV EVERQLLGGK IGAIIGAEEA 540 EKRRERMEDK EQWKVLMESA GFETVSLSHY AISQAKILLW NYNYSSSYSL IESKPGFLTL 600 AWKEVPLLTV SSWR*
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor involved in plant development (By similarity). Involved in environmental abiotic stress resistance. May increase the expression of stress-responsive genes (PubMed:20616154). Binds DNA in vitro (By similarity). {ECO:0000250|UniProtKB:Q53K16, ECO:0000250|UniProtKB:Q9SCR0, ECO:0000269|PubMed:20616154}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Up-regulated by drought and high salt stresses, and down-regulated by gibberellic acid (GA) treatment, but not by plant hormone abscisic acid (ABA) application in leaves. Under the salt treatment, expression is induced quickly, and it peaks at 3 hours. Under the drought treatment, the expression is not induced immediately, but reaches its maximum at 3 hours. Under the GA treatment, the expression becomes weaker within 5 hours. {ECO:0000269|PubMed:20616154}. |