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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Gorai.007G040400.1 |
Common Name | B456_007G0404002 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family |
Dof |
Protein Properties |
Length: 299aa MW: 32459.7 Da PI: 7.073 |
Description |
Dof family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Gorai.007G040400.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-Dof | 124.4 | 3.8e-39 | 30 | 90 | 2 | 62 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
+++alkcprCds+ntkfCyynny+lsqPryfCk+CrryWtkGG lrnvPvGgg+rk k+s+
Gorai.007G040400.1 30 HHQALKCPRCDSSNTKFCYYNNYNLSQPRYFCKNCRRYWTKGGVLRNVPVGGGCRKAKRSK 90
57899****************************************************9986 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 299 aa
Download sequence Send
to blast |
MQDIHLIEGG RLFNGGGDDG GGGDRKLRAH HQALKCPRCD SSNTKFCYYN NYNLSQPRYF 60 CKNCRRYWTK GGVLRNVPVG GGCRKAKRSK TKPSSETTVS ATVVSALPHP EQQQRQHQNS 120 DQRKADSHSS TESSSLNAAN CKVAVTNNNN NNSNSKNNSS LVGTTEAASA ITSRSTFYGN 180 PNNLGLEPGL LEQGSDGGIF AEIGSLTNLI TSPNNETLSF DFGTVLNRPG QWQPQQMTMS 240 MGGEEITKGL LDQTVQIEQS NLNIKLDSGF QPLDWEGSED QGLFGLPSTV DQTYWSVD*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | GQ393237 | 2e-68 | GQ393237.1 Gossypium hirsutum cultivar Deltapine 33 B clone MONCS0202 SSR marker CGR5097 genomic sequence. |