 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Gorai.006G214400.1 |
Common Name | B456_006G214400, LOC105800288 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
|
Family |
GATA |
Protein Properties |
Length: 517aa MW: 57594.7 Da PI: 6.6833 |
Description |
GATA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Gorai.006G214400.1 | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GATA | 50 | 4.1e-16 | 7 | 41 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
C +Cg+t+TplWR+gp ++ LCnaCG ++r kg+
Gorai.006G214400.1 7 CYHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGT 41
****************88888***********997 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0008270 | Molecular Function | zinc ion binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 517 aa
Download sequence Send
to blast |
MGKQGPCYHC GVTSTPLWRN GPPEKPVLCN ACGSRWRTKG TLANYTPLHA RAEPDDYEDN 60 RASRVKSISI NKNKEVKFLK RKPNHDTMVV APDYNQGFRK FVDDDTSNRS SSGSAISNSE 120 SCAQFGGADA SDLTGPAQSN VWDSMVPSKK RTCVNRPKPS PVEKLTKDLC SILHEQQSSY 180 FSGSSEEDLL LESQIPMVSF EFGHGSVLIR HPSSIAREEE SEASSLSVEN KQYSVNEAYS 240 HCSSFPTYND SKGFKISGHG IEKANTARQG MEHEQLRRDK VQHEKSLMLE SHNSPLCKID 300 LNDVLNFEEF MKHLTNEEQQ QLLQYLPPLD SSKFPDSLEN MFESPQFKEN LCYFQKLLEE 360 GVFKISVPGV KAEDCKTLKR LVLFNLTKSH WVEHCHVLKK CKSTIGGCAT ARGPNATALN 420 NLATMKRSRD SQCQNFPEAR NLNIPKRVIM KATCENKELV DNDGSCFSPG SLLTLPHDGS 480 SPLLDSLHYV DESSDQDLLL DVPSNGSFPL AELLHL*
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Transcriptional regulator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. {ECO:0000250}. |