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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Gorai.006G198300.1 |
Common Name | B456_006G198300, LOC105800122 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family |
GRAS |
Protein Properties |
Length: 611aa MW: 66956.6 Da PI: 6.5195 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Gorai.006G198300.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 360.5 | 2.5e-110 | 242 | 610 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilk 92
+++++e+A a+++g++ a+++L+rl + ++ +g++ qR +a+++ AL++r+++ + + p+ e s+e++aa++l++++sP++k
Gorai.006G198300.1 242 KQTIMEAASAIAEGKTDVANEILTRLAQDSNAKGNSEQRFVACMLLALKSRINS----VENPPPVAEL---FSKEHAAATQLLYDLSPCFK 325
5789*************************************************9....4443343333...49****************** PP
GRAS 93 fshltaNqaIleavege...ervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefn 179
+++l+aN aIl+a+ + +++HiiDfdi++G Q+++Ll+aL++R +g+p ++iT++++ +g e+++ ++++L+++Ae++gv ++fn
Gorai.006G198300.1 326 LGFLAANLAILDATRDQpscNKLHIIDFDIGKGRQYINLLHALSERGSGKPaLVKITAIAD--NGGDERVKMVEDKLSEIAERFGVCMKFN 414
***************9988899*************************7766589*******..779************************* PP
GRAS 180 vlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfds 270
v+++ +l dl+ e+L ++p+E la+n++++l+r++desvs+e++rde+L+ vk+l P vv++ve+e+++n+++F r+ ea yy alfds
Gorai.006G198300.1 415 VVASPKLIDLSRESLGCEPDEPLAINFAFNLYRMPDESVSVENQRDELLRRVKGLTPSVVTLVEHEMNTNTAPFTSRVGEASAYYGALFDS 505
*8888************************************************************************************** PP
GRAS 271 leaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk..sdgyrveeesgslv 359
+e+++pre++er++vE+ l r+i n v+ceg+er+er+e ++kWr+r+++aGF+ plse++a+++++ l+ + + g++v+ee+g ++
Gorai.006G198300.1 506 IESSVPREKSERVMVEEG-LCRKIANSVSCEGRERVERCEVFGKWRARMSMAGFELKPLSESVAESMRARLNSGNrvNPGFTVKEENGGVC 595
******************.99************************************************9998777789************ PP
GRAS 360 lgWkdrpLvsvSaWr 374
+gW++r+L+++SaWr
Gorai.006G198300.1 596 FGWMGRTLTVASAWR 610
**************8 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
Protein Sequence Length: 611 aa
Download sequence Send
to blast |
MASGHSTGGP DFYAGIEGRS VASNQTTAPY RTRIPGIFMD PASQIVNRAV PNLVGKRTLA 60 DFQKQQLHYN HPVRNDLLYL RSVKPRTTYQ HSSTISPMDF SSNLSPDVMG NFSSPSSCIS 120 QRYYGLPLLQ HPRPQQAMNP GFSSVQQMSP IQMRVVHPQD PEKKMMNRLQ ELEKQLLDDE 180 NDDEGDAVSV ISNTNSEWSE TIQNLISSGS PIQPVAPSST SSTTSSSSST TSVVSPAPTS 240 SKQTIMEAAS AIAEGKTDVA NEILTRLAQD SNAKGNSEQR FVACMLLALK SRINSVENPP 300 PVAELFSKEH AAATQLLYDL SPCFKLGFLA ANLAILDATR DQPSCNKLHI IDFDIGKGRQ 360 YINLLHALSE RGSGKPALVK ITAIADNGGD ERVKMVEDKL SEIAERFGVC MKFNVVASPK 420 LIDLSRESLG CEPDEPLAIN FAFNLYRMPD ESVSVENQRD ELLRRVKGLT PSVVTLVEHE 480 MNTNTAPFTS RVGEASAYYG ALFDSIESSV PREKSERVMV EEGLCRKIAN SVSCEGRERV 540 ERCEVFGKWR ARMSMAGFEL KPLSESVAES MRARLNSGNR VNPGFTVKEE NGGVCFGWMG 600 RTLTVASAWR *
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed in seedlings, roots, leaves and siliques. {ECO:0000269|PubMed:10341448, ECO:0000269|PubMed:18500650}. |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |