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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Gorai.006G113000.1 |
Common Name | B456_006G113000 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family |
NAC |
Protein Properties |
Length: 229aa MW: 25888.1 Da PI: 6.5199 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Gorai.006G113000.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 137.8 | 7.1e-43 | 4 | 135 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdi.ykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatg 87
+ GfrF Pt+eelv++yL+++++g + +++ vi+ ++i y++ePwdLpk +k++ ++w++F++r++++a+g r++r+t+sgyWkatg
Gorai.006G113000.1 4 AIGFRFFPTEEELVSFYLRNQLQGMRQDMHLVIPVLNIfYDLEPWDLPKlageLCKGDVEQWFYFTPRQEREARGGRASRTTASGYWKATG 94
68***************************889****873678******656765566888******************************* PP
NAM 88 kdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
+ v+s++++++g+kkt+vfykg+ap+g+kt+W m+eyr+
Gorai.006G113000.1 95 SPGFVYSSDDRVIGMKKTMVFYKGKAPNGRKTKWKMNEYRA 135
***************************************96 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 229 aa
Download sequence Send
to blast |
MEMAIGFRFF PTEEELVSFY LRNQLQGMRQ DMHLVIPVLN IFYDLEPWDL PKLAGELCKG 60 DVEQWFYFTP RQEREARGGR ASRTTASGYW KATGSPGFVY SSDDRVIGMK KTMVFYKGKA 120 PNGRKTKWKM NEYRAIEALS DPYVSAPPKL RHEFSLCRVY VASSSSRAFD RRPLEAHNNA 180 ATTSGGASGT SHAGGDHYNP AEASEDEFWE LVNNLEEHAI GWGQINEI*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 2e-30 | 1 | 167 | 15 | 170 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 2e-30 | 1 | 167 | 15 | 170 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 2e-30 | 1 | 167 | 15 | 170 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 2e-30 | 1 | 167 | 15 | 170 | NO APICAL MERISTEM PROTEIN |
4dul_A | 2e-30 | 1 | 167 | 15 | 170 | NAC domain-containing protein 19 |
4dul_B | 2e-30 | 1 | 167 | 15 | 170 | NAC domain-containing protein 19 |
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