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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Gorai.006G015500.1 |
Common Name | B456_006G015500, LOC105798170 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family |
Dof |
Protein Properties |
Length: 459aa MW: 51183.9 Da PI: 6.6558 |
Description |
Dof family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Gorai.006G015500.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-Dof | 122.6 | 1.4e-38 | 135 | 194 | 3 | 62 |
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
+k l+cprC+s++tkfCyynny++sqPr+fCk+C+ryWt+GG++rnvPvG+grr++k+ss
Gorai.006G015500.1 135 NKVLPCPRCNSMDTKFCYYNNYNVSQPRHFCKNCQRYWTAGGTMRNVPVGAGRRRSKNSS 194
67899****************************************************987 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 459 aa
Download sequence Send
to blast |
MMEPNDLTIK LFGKTIPLPV KSPKAVVAAT ISNIYATCDD ACNHNNNYKK DIVTDKTIDA 60 EHELGDRKED RSKQDGTAPL VASEEFTNLE VTYGPSDKRD ALSIENESTG LETCKTDEDR 120 NETSNPEEKT LKKLNKVLPC PRCNSMDTKF CYYNNYNVSQ PRHFCKNCQR YWTAGGTMRN 180 VPVGAGRRRS KNSSSHYRHV IVSEPLRNAC DDETMCNTTQ NRFHKPEELN IHVSYRGGKN 240 GVEHLNGSSI ATSNDEVYKA GSQDQMMQNC RSFPPHMPCF PGFFLPYSWN SARWSSPLPP 300 PTFCPPSFSM PFYPTAPYWG CALPTSWNVP WLPQPSSEMQ TAPSSGSNSP SLGKHSRDED 360 MGKPCSIGED EPVNENNAER CLWISKTLRI DDPGEASRSS IWVTSSSKND KLDSIGDERL 420 FKGFQSKGDK RNQVLETSPI LQASPAASSR SINFQESS*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AJ567176 | 3e-93 | AJ567176.1 Gossypium hirsutum microsatellite DNA mGhCIR230, clone CIR230. |