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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Gorai.005G105400.1 |
Common Name | B456_005G105400, LOC105793765 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family |
B3 |
Protein Properties |
Length: 536aa MW: 60596.3 Da PI: 8.6673 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Gorai.005G105400.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 57 | 3.5e-18 | 12 | 99 | 4 | 99 |
E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
B3 4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96
v+ s++++ + l++p f ++ +g s + l+ +sg sW+vkl ++ + ++ +GW +Fv ++ L+ gDf+vF++dg+ f vkv
Gorai.005G105400.1 12 VF--SSTSSANSLRIPVGFNRNLEGR--VSASVLLKGPSGYSWNVKL--VQRNDDLLFDEGWADFVADHSLECGDFLVFRYDGDLVF--EVKV 96
44..77788888*******9888766..4557***************..777778**************************998777..9999 PP
E-S CS
B3 97 frk 99
f++
Gorai.005G105400.1 97 FDQ 99
987 PP
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2 | B3 | 52.5 | 9.1e-17 | 227 | 320 | 2 | 98 |
EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
B3 2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91
+ ++++ +v+ s l +p +fa eh ++++++l+l++++g W+v+ ++ +++l +GW +Fv++n++k+gD+++F+l++ +fe
Gorai.005G105400.1 227 VRIMKRFNVSGSYTLNIPYQFAMEHL--PNCKTELVLQNLKGACWTVNSVPtTRVHTSHTLCGGWLSFVRSNEIKAGDICIFELVH--KFE 313
56667778888899********9996..45899***************954566666799***********************987..788 PP
.EEEEE- CS
B3 92 lvvkvfr 98
++v+++r
Gorai.005G105400.1 314 FRVHILR 320
8999987 PP
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3 | B3 | 49.8 | 6.1e-16 | 440 | 520 | 13 | 96 |
TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
B3 13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96
s l +p kf +eh + ++++++l++++g+ W+v+ + k+++ +++ +GW Fv++n++k gD+++F+l+++ e++v++
Gorai.005G105400.1 440 SYTLKIPYKFSKEHL--PYCKTQVVLRNLQGKCWTVNSLPDSKGRAvHTFCGGWMAFVRDNEIKIGDICIFELVNN--YEMRVHI 520
45699*********4..346778***************6655555579999*********************9875..3345555 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 536 aa
Download sequence Send
to blast |
MSKPRRPHFL NVFSSTSSAN SLRIPVGFNR NLEGRVSASV LLKGPSGYSW NVKLVQRNDD 60 LLFDEGWADF VADHSLECGD FLVFRYDGDL VFEVKVFDQS SCEKEVAFHC KCSQAGSVFN 120 GILGQKRYRE EEDVSLDQDC EELLKRIRQS SSESVRDEEH CGRELILATT SCQGLTSCDE 180 NHDGTILKIT GKEDDLNLHG SGCIQMIGEF EEKKVAQSFN SCFPFFVRIM KRFNVSGSYT 240 LNIPYQFAME HLPNCKTELV LQNLKGACWT VNSVPTTRVH TSHTLCGGWL SFVRSNEIKA 300 GDICIFELVH KFEFRVHILR VGQEDLDRQS RKAVLDRSDS TLLKKLVKNT SKVHSKLKKV 360 QICDNKGSKV LDKWKYGNAA KKSASFVLCS LSRSGTEKQE AAISGLRMMM TVDEEKAARS 420 FASRFPSFVR IMRKFNISGS YTLKIPYKFS KEHLPYCKTQ VVLRNLQGKC WTVNSLPDSK 480 GRAVHTFCGG WMAFVRDNEI KIGDICIFEL VNNYEMRVHI SGPGRKGLDR QHTSL*
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