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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Gorai.005G049200.1 |
Common Name | B456_005G049200, LOC105796721 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family |
ERF |
Protein Properties |
Length: 138aa MW: 15237.7 Da PI: 8.8135 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Gorai.005G049200.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 65.1 | 1.4e-20 | 16 | 68 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56
++y+GVr+++ +g+++AeIrd + + +r++lg+f taeeAa+a+++a+ +++g+
Gorai.005G049200.1 16 TRYRGVRRRP-WGKFAAEIRDS---NrHGARVWLGTFNTAEEAARAYDRAAYSMRGH 68
68********.**********4...3234**************************97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 138 aa
Download sequence Send
to blast |
MEGSSSKGKE EGGETTRYRG VRRRPWGKFA AEIRDSNRHG ARVWLGTFNT AEEAARAYDR 60 AAYSMRGHLA ILNFPQEYPM GSGGATAYRG SSSAASSSSS SSSSMDQRGK QVFEIEYLDD 120 KLLEELLENE EKNKEKK*
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Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | JX616690 | 0.0 | JX616690.1 Gossypium hirsutum clone NBRI_GE61537 microsatellite sequence. |