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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Gorai.004G193200.1 |
Common Name | B456_004G193200, LOC105792012 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family |
GATA |
Protein Properties |
Length: 539aa MW: 59815.9 Da PI: 6.606 |
Description |
GATA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Gorai.004G193200.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GATA | 49.9 | 4.3e-16 | 7 | 41 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
C +Cg+t+TplWR+gp ++ LCnaCG ++r kg+
Gorai.004G193200.1 7 CYHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGT 41
****************88888***********997 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0008270 | Molecular Function | zinc ion binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 539 aa
Download sequence Send
to blast |
MGKQGPCYHC GVTSTPLWRN GPPEKPVLCN ACGSRWRTKG TLTNYTPLHA RVEPEDYEDH 60 RASRLKIISI NKNKEVKLLK RKSNHDKAVV VPDYNQGNRK FVDDDTSNRS SSGSAISNSE 120 SCAQFGCADA GDLTGPAQSN VWDSMVPSKK RTCVNRPKPS SVEKLTKDLY TILHEQQSSY 180 FSGSSEEDLL LESETPMVSV EIGHGSVLIR HPSSIAREEE SEASSLSVEN RQYSRNEAYS 240 YSSSFPACND SKGIKFLGHG IERAKSSAGQ GIQHEQLNRD KSQHEKSLLM ESHNSPLCNI 300 DLNDILNYEE FVKCLTNEEQ QQLLQYLPPL DIANLPDSLE SMFESPQFKE NLCYFQQLLE 360 EGVFSVSVPG VKVEDCKTLK RLALFDLTKS HWVERRQTLK KCNSIPGSMN ARGPNAIASN 420 NSVTMKRSRN SQIQNFPESR TLKSPKRVIM KASCENKELI DNDGFCFSPR SLFALPSDGS 480 SLMLDSLHFV DESSDQDLLL DVPSNGSFAQ AELLHPALSF GQQASTSSSS AHPNPFHP*
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional regulator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. {ECO:0000250}. |