PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Gorai.003G039400.1 | ||||||||
Common Name | B456_003G039400 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family | bHLH | ||||||||
Protein Properties | Length: 116aa MW: 12822 Da PI: 9.6564 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 11.6 | 0.00052 | 74 | 100 | 10 | 32 |
HHHHHHHHHHHHHHHCTSCCC...... CS HLH 10 rrRRdriNsafeeLrellPkas....k 32 r RR+ +++e L++++ k++ k Gorai.003G039400.1 74 RLRRASTSDCLESLKSIVVKPPlslsK 100 88*****************97545551 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 116 aa Download sequence Send to blast |
MFISLFSSSF LFYFGCRGQW GCYRIPSTVK SSCSMPVQKL LSHVIGIIRV LFSRKEESVL 60 ERSLAYLLLN GKGRLRRAST SDCLESLKSI VVKPPLSLSK LQDQEAAEEA EKSAA* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A0D2MJ18 | 1e-76 | A0A0D2MJ18_GOSRA; Uncharacterized protein | ||||
STRING | Gorai.003G039400.1 | 2e-77 | (Gossypium raimondii) |
Link Out ? help Back to Top | |
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Phytozome | Gorai.003G039400.1 |
Publications ? help Back to Top | |||
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