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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Gorai.003G038200.1 |
Common Name | B456_003G038200 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family |
ERF |
Protein Properties |
Length: 315aa MW: 35273.6 Da PI: 6.8634 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Gorai.003G038200.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 66.8 | 4.3e-21 | 151 | 201 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
y+GVr+++ +g+WvAeIr p++ r+r +lg+f+taeeAa a+++a+ kl+ge
Gorai.003G038200.1 151 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEEAALAYDKAAYKLRGE 201
59******9.**********965...5**************************97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 315 aa
Download sequence Send
to blast |
MAAVIDMYNS SRNSVFYDPL REELMKALEP FMKSASSSSS PLQPNLYPEY CSPLNSSTHL 60 FSNHGFSNYN KNMLGFEQTG SSLGLNQLTP SQILQIQSQI LHQQQQQQVA SMAAVATPPP 120 TTFENPRVGF LSPKPVPMKH VSSTPPKAAK LYRGVRQRHW GKWVAEIRLP KNRTRLWLGT 180 FDTAEEAALA YDKAAYKLRG EFARLNFPHL KHQGAHLQAI CQSLQAQGNP VKTKTLPKAA 240 EFHYPIKTEE FDHKQDNSSS SSSSVDESSL AGSLSSPESD ITFFDFSDSK WEDNEIENFN 300 LDKFPSLEID WEAI*
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Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HQ527105 | 0.0 | HQ527105.1 Gossypium herbaceum clone NBRI_D2_459 simple sequence repeat marker, mRNA sequence. |