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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Gorai.003G021000.1 |
Common Name | B456_003G021000, LOC105787593 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family |
Dof |
Protein Properties |
Length: 248aa MW: 25546.3 Da PI: 8.8761 |
Description |
Dof family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Gorai.003G021000.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-Dof | 121.7 | 2.5e-38 | 24 | 84 | 2 | 62 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
++++l cprCdstntkfCyynny+ sqPryfCk+CrryWt+GG+lr++P+Ggg+rkn k+s
Gorai.003G021000.1 24 EQEQLLCPRCDSTNTKFCYYNNYNFSQPRYFCKSCRRYWTHGGTLRDIPIGGGTRKNAKRS 84
578899***************************************************9876 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009733 | Biological Process | response to auxin |
GO:0009751 | Biological Process | response to salicylic acid |
GO:0042545 | Biological Process | cell wall modification |
GO:0045787 | Biological Process | positive regulation of cell cycle |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 248 aa
Download sequence Send
to blast |
MPSSSADQSR RFNKGLNNGA PPPEQEQLLC PRCDSTNTKF CYYNNYNFSQ PRYFCKSCRR 60 YWTHGGTLRD IPIGGGTRKN AKRSRSNIST TTSFSTTNAA ASAATTTTTT TTSYNSFPLP 120 ATPVLLPISA NQGSFSIGGE SKGSNIFGSF TSLLNTQGPG FLALGGFGLG IAPSLDDVGF 180 GLGRGMWPLP CVGDGGAAGG GGGRGNGGAA TGMGNAWQFE GAETGFVGGD CFSWPDLAIS 240 TPANGVK*
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Constitutively expressed in the whole plant. {ECO:0000269|PubMed:10758484, ECO:0000269|PubMed:8718629}. |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence. Enhances the DNA binding of OBF transcription factors to OCS elements. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By auxin and salicylic acid (SA). {ECO:0000269|PubMed:10758484}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | JX616606 | 0.0 | JX616606.1 Gossypium hirsutum clone NBRI_GE61393 microsatellite sequence. |