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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Gorai.002G080600.1 |
Common Name | B456_002G080600, LOC105780024 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family |
GRAS |
Protein Properties |
Length: 585aa MW: 64917.3 Da PI: 6.4633 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Gorai.002G080600.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 426.7 | 1.9e-130 | 211 | 580 | 1 | 373 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPil 91
l++lL++cA+++s++++ + ++l+a+ + +s +g+p+qRl ay++e+L ar s+s++y+al+++e + ++ l+++++++e++P+l
Gorai.002G080600.1 211 LKQLLIACAKVLSENNMDEFDKLIAKARGAVSISGEPVQRLGAYMVEGLVARKEASGSSIYRALHCREPE---GKDLLSYMQVLYEICPYL 298
689******************************************************************9...9***************** PP
GRAS 92 kfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnv 180
kf+h++aN aI ea +e+r+HiiDf+i qG+QW++LlqaLa+Rp+g+p++RiTg+++p s+ + le++++rL+ + e++++p+ef+
Gorai.002G080600.1 299 KFGHMAANGAIAEACRTEDRIHIIDFQIAQGTQWMTLLQALAARPGGAPHVRITGIDDPISKyaRGGGLEAVKRRLEALSEKFNIPVEFQG 389
**********************************************************999989999************************ PP
GRAS 181 lvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsl 271
+ d++ ++L+v+pgEalaVn+ lqlh+++desv+++++rd +L++vkslsPkv ++veqe+++n+++Fl rf+e+leyy a+f+s+
Gorai.002G080600.1 390 -MPVFAPDITRDMLDVRPGEALAVNFPLQLHHTPDESVDVNNPRDGLLRMVKSLSPKVTTLVEQESNTNTAPFLPRFIETLEYYLAMFESI 479
.6888999*********************************************************************************** PP
GRAS 272 eaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgW 362
+++lpr+ +er++vE+++l+r+ivn++aceg+er+erhe ++kW++rl++aGF+++pls+++++ ++ llr ++ + y++ e++g+++lgW
Gorai.002G080600.1 480 DETLPRDRKERVNVEEHCLARDIVNIIACEGKERVERHELFGKWKSRLTMAGFRQYPLSSYVNSVIRGLLRCYS-KHYKLVEKDGAMLLGW 569
**********************************************************************9999.55************** PP
GRAS 363 kdrpLvsvSaW 373
kdr+L+s+SaW
Gorai.002G080600.1 570 KDRNLISASAW 580
*********** PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
Protein Sequence Length: 585 aa
Download sequence Send
to blast |
MDSHQLFGYG VTGAGLSYST FPSIPNRLFS SLKSDIGNSP NSPFFTPFDC DTNTTLSDSQ 60 EQHSSTENLS GLSPSCNSSL ESNTCFHRLS PSLGCRSESL LFSSGGTSYT QDANSGHKVI 120 YTLQELETAL MAPDENEDLT TPSVSHGESS RPQTAGQRSR AWSQERQGSL ALLPQTSFVS 180 KHRQSTEVSH VEKRQKSIED FSWLGIPPGN LKQLLIACAK VLSENNMDEF DKLIAKARGA 240 VSISGEPVQR LGAYMVEGLV ARKEASGSSI YRALHCREPE GKDLLSYMQV LYEICPYLKF 300 GHMAANGAIA EACRTEDRIH IIDFQIAQGT QWMTLLQALA ARPGGAPHVR ITGIDDPISK 360 YARGGGLEAV KRRLEALSEK FNIPVEFQGM PVFAPDITRD MLDVRPGEAL AVNFPLQLHH 420 TPDESVDVNN PRDGLLRMVK SLSPKVTTLV EQESNTNTAP FLPRFIETLE YYLAMFESID 480 ETLPRDRKER VNVEEHCLAR DIVNIIACEG KERVERHELF GKWKSRLTMA GFRQYPLSSY 540 VNSVIRGLLR CYSKHYKLVE KDGAMLLGWK DRNLISASAW HCDS*
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Functional Description ? help
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Source |
Description |
UniProt | May play a regulatory role in the early step of oligosaccharide elicitor response, downstream of the membrane-associated high-affinity chitin-binding protein. {ECO:0000269|PubMed:12591613}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By oligosaccharide elicitor (N-Acetylchitooligosaccharide) extracted from the rice blast fungus (M.grisea) cell wall. Strongest induction by chitin oligomer with greater degree of polymerization (heptamer). By inoculation of M.grisea in rice cell suspension culture. {ECO:0000269|PubMed:12591613}. |