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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Gorai.002G021600.1 |
| Common Name | B456_002G021600, LOC105774348 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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| Family |
Trihelix |
| Protein Properties |
Length: 364aa MW: 39636.1 Da PI: 5.3752 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Gorai.002G021600.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 91.6 | 8.4e-29 | 50 | 144 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgk.........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyf 82
rWt+qe+l+Li+++r e+r+rrg+ + +p+W++vs++++++g++r+p+qC+++w+nl++++kkike+e++ ++es+s +++
Gorai.002G021600.1 50 RWTRQEILVLIQGKRVAENRVRRGRaaglafgsgQVEPKWASVSSYCKRHGVNRGPVQCRKRWSNLAGDFKKIKEWENNTREESESFWVMR 140
8**********************97778888888*********************************************999999999999 PP
trihelix 83 dqle 86
++l+
Gorai.002G021600.1 141 NDLR 144
9986 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0045892 | Biological Process | negative regulation of transcription, DNA-templated |
| GO:0050777 | Biological Process | negative regulation of immune response |
| GO:0071219 | Biological Process | cellular response to molecule of bacterial origin |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0042803 | Molecular Function | protein homodimerization activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 364 aa
Download sequence Send
to blast |
MASEQLSMAA TPDPIDGRKD AVNAAINGVE SRPLSVDCGD DVSKAPRLPR WTRQEILVLI 60
QGKRVAENRV RRGRAAGLAF GSGQVEPKWA SVSSYCKRHG VNRGPVQCRK RWSNLAGDFK 120
KIKEWENNTR EESESFWVMR NDLRRERKLP GFFDKEVYDI LDGAAAVSSA VEIPDSVVAP 180
ALALALTPTP AVQDTAEDNE AVFDSGRSAA AEDGLFSDFE QDDGAGSPEK VELPVSADAG 240
KSVPAPIPIS EQQHQQQPAI PGSKSQGATK EKHPTSNPEV GSASQEARKR KRTETNGDEE 300
PDNSPQYHLI DVLEKNGKML VAQLEAQNTN FQQERQQRKD HADSLVAVLN KLADALGRIA 360
DKL*
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcriptional repressor that binds DNA and plays a negative role in regulating microbe-associated molecular patterns-(MAMPs, e.g. flg22, elf18, chitin, and LPS) triggered immunity (PTI) by negatively regulating immune gene expression. {ECO:0000269|PubMed:25770109}. |
