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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Gorai.001G207600.1 |
| Common Name | B456_001G207600, LOC105771448 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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| Family |
GRAS |
| Protein Properties |
Length: 418aa MW: 46777 Da PI: 8.1684 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Gorai.001G207600.1 | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 341.8 | 1.1e-104 | 35 | 416 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPil 91
l++lLl+cA++ ss++l++a+++L ++s las +gd+mqRl a f+ ALa rl++ +++l k l+ ++ ++ +++ +a+ lf v+P+l
Gorai.001G207600.1 35 LIQLLLTCAKHASSSNLHRADECLRQISLLASVSGDSMQRLSAWFASALAVRLVKRWPGLHKVLNYTQLPK--QDQLGQAQPLFGRVCPYL 123
689*****************************************************************995..777788999********* PP
GRAS 92 kfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlv 182
fs+ + +++ +a+ ge+ +H +D++ + W++Ll+++++ +g+p+l++T +++ +k lee+g rL k Ae+lg+pf+f +l
Gorai.001G207600.1 124 GFSYAIISRTLIKAMTGERVIHLVDLGSGDANLWIPLLRSFSCLLDGQPHLKVTCMNA----NKAILEELGPRLVKEAEALGLPFQFAPL- 209
**********************************************************....99*************************5. PP
GRAS 183 akrledleleeLrvkpgEalaVnlvlqlhrll..............desvsleserdevLklvkslsPkvvvvveqeadhnsesFlerfle 259
+l +l+l++L vk+gEala ++l+lh+ll + + +++ ++L++++s sPk++ +ve+eadhn +++++rf+e
Gorai.001G207600.1 210 NVSLRELTLDKLGVKSGEALAFISILNLHSLLaeddsvdahfshnkTNGIKDSKQMFRFLSTIRSSSPKLFFLVEKEADHNLNKLVDRFVE 300
889*************************************999976333444446778********************************* PP
GRAS 260 aleyysalfdsleaklpres..eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdg 348
l+yysa+fds++a+++ ++ +er ++E++ +g+ei+n+vaceg er+erhe++++W r+++aGFkpv + ++ +++ak +++ ++ +g
Gorai.001G207600.1 301 GLHYYSAVFDSVDATFGGNTssRERLVLEEM-FGKEIENIVACEGVEREERHERYGRWMVRFGQAGFKPVMMWHDSTEDAKQMVEACGRNG 390
************9999876657999999999.*********************************************************** PP
GRAS 349 yrveeesgslvlgWkdrpLvsvSaWr 374
y++ +e++sl+++W+drpL++vSaW+
Gorai.001G207600.1 391 YKIVNERASLMICWHDRPLYAVSAWT 416
*************************6 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 418 aa
Download sequence Send
to blast |
MMRSSPKPEV TLSLALSPGS TLQEVVKPQE RGVRLIQLLL TCAKHASSSN LHRADECLRQ 60
ISLLASVSGD SMQRLSAWFA SALAVRLVKR WPGLHKVLNY TQLPKQDQLG QAQPLFGRVC 120
PYLGFSYAII SRTLIKAMTG ERVIHLVDLG SGDANLWIPL LRSFSCLLDG QPHLKVTCMN 180
ANKAILEELG PRLVKEAEAL GLPFQFAPLN VSLRELTLDK LGVKSGEALA FISILNLHSL 240
LAEDDSVDAH FSHNKTNGIK DSKQMFRFLS TIRSSSPKLF FLVEKEADHN LNKLVDRFVE 300
GLHYYSAVFD SVDATFGGNT SSRERLVLEE MFGKEIENIV ACEGVEREER HERYGRWMVR 360
FGQAGFKPVM MWHDSTEDAK QMVEACGRNG YKIVNERASL MICWHDRPLY AVSAWTC*
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