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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Gorai.001G023100.3 |
| Common Name | B456_001G023100, LOC105803648 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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| Family |
TALE |
| Protein Properties |
Length: 561aa MW: 62035.8 Da PI: 5.765 |
| Description |
TALE family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Gorai.001G023100.3 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 26 | 1.6e-08 | 500 | 538 | 18 | 54 |
HHHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
Homeobox 18 lFek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54
+F++ ++yp+ +e+ LA k gLt +qV++WF N R +
Gorai.001G023100.3 500 MFQNflHPYPKDAEKHLLAIKSGLTRSQVSNWFINARVR 538
5887779******************************88 PP
|
| 2 | BELL | 79.9 | 3.4e-26 | 373 | 442 | 2 | 72 |
BELL 2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72
++ +++kk++Ll+ll+ Vd+rY+q+ ++++tvis+F+a+++l++ ++++s+Al++iS+ +++L+++i++qi
Gorai.001G023100.3 373 KRTVEAKKTQLLTLLQVVDDRYSQCLDEIHTVISAFHAATELDP-RVHASFALHTISFLYKNLRERISNQI 442
56789***************************************.*************************8 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0008285 | Biological Process | negative regulation of cell proliferation |
| GO:0009640 | Biological Process | photomorphogenesis |
| GO:0010073 | Biological Process | meristem maintenance |
| GO:0010227 | Biological Process | floral organ abscission |
| GO:0010228 | Biological Process | vegetative to reproductive phase transition of meristem |
| GO:0010371 | Biological Process | regulation of gibberellin biosynthetic process |
| GO:0090470 | Biological Process | shoot organ boundary specification |
| GO:0005634 | Cellular Component | nucleus |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 561 aa
Download sequence Send
to blast |
MENDMFSIPR PMVSQNSVVI NGIPPETITN NSVVESNLFN QINQNQTLVG FPVLPSVQGE 60
FGGDLCSDLH VSNHARFFDS NALIASVGRK VASDASLGSS GLEHNIEFHE QFIGRTPVSS 120
NPPASCGLQE NLNELAIIAP SIYPQDFRNY SSTECSDGIN STTVTSVNSV LNEVFGSMTN 180
KWDFEKFPGP LEHVGKTTLK TAFQPYSSIG CPDPNSWMAP NGANMSLDYP CGSSKNSNEL 240
SLSLATSLPG VINGNNIPDQ SSEINCCLNT TRLGSEQTSS NAKELSLSFG SDGPVQVSHL 300
ISGSRYLHAV QEILAQIANY SLENLEQMSV GPGATMPFSG SCLAGRWMAV MDSNDCPNVD 360
GNTEVQLEAE LQKRTVEAKK TQLLTLLQVV DDRYSQCLDE IHTVISAFHA ATELDPRVHA 420
SFALHTISFL YKNLRERISN QILAMGANFN SACTRDREKS FQNSFIQEQW ALQQLKKKDQ 480
IWRPQRGLPE KSVSVLRAWM FQNFLHPYPK DAEKHLLAIK SGLTRSQVSN WFINARVRLW 540
KPMIEEMYLE MNKRKARQNE *
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | DEVELOPMENTAL STAGE: Down-regulated in the shoot apical meristem (SAM) upon floral induction. {ECO:0000269|PubMed:17908157}. |
| Uniprot | TISSUE SPECIFICITY: Most abundant in flowers. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor which may be involved in the signal transduction pathway downstream of the COP1 gene. Controls floral competency as a specific activator of FLC expression. Is responsive of the nuclear import of SHOOT MERISTEMLESS (STM). {ECO:0000269|PubMed:17908157}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By light. In etiolated seedlings, maximally expressed after 3 days of illumination. |
