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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Glyma.20G249900.1.p |
| Common Name | GLYMA_20G249900, LOC100779050 |
| Organism |
|
| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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| Family |
Trihelix |
| Protein Properties |
Length: 320aa MW: 35818.9 Da PI: 6.3333 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.20G249900.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 92.9 | 3.3e-29 | 30 | 124 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgk.........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpy 81
rWt+qe+l+Li+++r+ e+++rrg+ + +p+W++vs+++r++g++r+p+qC+++w+nl+++ykkike+e++ ++e++s +++
Glyma.20G249900.1.p 30 RWTRQEILVLIQGKRDAENKFRRGRtaglafgsgQVEPKWASVSSYCRKHGVNRGPVQCRKRWSNLAGDYKKIKEWESQIRDETESFWVM 119
8**********************97778888888***********************************************999999*99 PP
trihelix 82 fdqle 86
++l+
Glyma.20G249900.1.p 120 RNDLR 124
99986 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0045892 | Biological Process | negative regulation of transcription, DNA-templated |
| GO:0050777 | Biological Process | negative regulation of immune response |
| GO:0071219 | Biological Process | cellular response to molecule of bacterial origin |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0042803 | Molecular Function | protein homodimerization activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 320 aa
Download sequence Send
to blast |
MALEQEVGQN RNTNGVDGGD EGGKAPRLPR WTRQEILVLI QGKRDAENKF RRGRTAGLAF 60
GSGQVEPKWA SVSSYCRKHG VNRGPVQCRK RWSNLAGDYK KIKEWESQIR DETESFWVMR 120
NDLRRERKLA GFFDKEVYDI LDSGSGPTTL ALSLSSSPPP TTTITTTTVP DDPPHLYDSN 180
RSAPGEDGLF SDFEQDEEKN PPSNKDIPAP IPISEKQYLR RCQAEGVTNE KLSTSNPEMG 240
STSQGERKRK RLTTDGEEET LQYQLIDVLE RNGKMLSAQL EAQNINFQLD REQRKDHASN 300
LVAVLDKLAD ALGKIADKL*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional repressor that binds DNA and plays a negative role in regulating microbe-associated molecular patterns-(MAMPs, e.g. flg22, elf18, chitin, and LPS) triggered immunity (PTI) by negatively regulating immune gene expression. {ECO:0000269|PubMed:25770109}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015041 | 1e-142 | AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari. |
