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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.20G214300.1.p |
Common Name | GLYMA_20G214300 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
ZF-HD |
Protein Properties |
Length: 191aa MW: 21579.8 Da PI: 8.8372 |
Description |
ZF-HD family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.20G214300.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | ZF-HD_dimer | 102.6 | 2.7e-32 | 8 | 62 | 4 | 59 |
ZF-HD_dimer 4 vrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59
+rYkeClkNhAa++Gg+a+DGCgEfm++ geegt +alkC+AC+CHRnFHR+e e+
Glyma.20G214300.1.p 8 IRYKECLKNHAAAIGGNATDGCGEFMAA-GEEGTLEALKCSACNCHRNFHRKEIES 62
79*************************9.999********************9876 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 191 aa
Download sequence Send
to blast |
MEDKKIIIRY KECLKNHAAA IGGNATDGCG EFMAAGEEGT LEALKCSACN CHRNFHRKEI 60 ESSDSNAIPL MIIPDTTQII RPILAHLSPN KSGSISPSDL SDEKENEDGM MIKEVENPNE 120 KVKKRFRTKF TQEQKEKMLA FAERAGWRIQ KLDESLVQKF CQEIGIKRRV LKVWMHNNKN 180 TFAKRNPSTS *
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Expression --
Description ? help
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Source |
Description |
Uniprot | DEVELOPMENTAL STAGE: Not detected in the meristem prior to exposure to long days (LDs), but after exposure to three LDs, stable accumulation on the flanks of the meristem adjacent to floral primordia, during floral induction. {ECO:0000269|PubMed:22319055}. |
Uniprot | TISSUE SPECIFICITY: Mostly expressed in flowers and inflorescence. {ECO:0000269|PubMed:16428600}. |
Functional Description ? help
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Source |
Description |
UniProt | Putative transcription factor. Probably involved in the regulation of floral induction. {ECO:0000269|PubMed:22319055}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by exposure to long days. {ECO:0000269|PubMed:22319055}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC235423 | 0.0 | AC235423.1 Glycine max strain Williams 82 clone GM_WBb0137C18, complete sequence. |