 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Glyma.20G177600.1.p |
Common Name | GLYMA_20G177600, LOC100806667 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
|
Family |
LBD |
Protein Properties |
Length: 223aa MW: 24062.7 Da PI: 6.8671 |
Description |
LBD family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.20G177600.1.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF260 | 135.9 | 1.5e-42 | 69 | 168 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90
+CaaCk+lrr+C+++Cvlapyfp ++p kf ++h++FGasn++k+l++lpe++r da+ss+vyeA+ar+rdPvyG++g i +lq+q+++l
Glyma.20G177600.1.p 69 PCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEANARIRDPVYGCAGAICQLQKQVSEL 158
7***************************************************************************************** PP
DUF260 91 kaelallkee 100
+a+la++++e
Glyma.20G177600.1.p 159 QAQLAKAQAE 168
*****99976 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 223 aa
Download sequence Send
to blast |
MEYKVKTTTS TPSPPIPIHL PTMLSNSPPS SSSSPPSQSP TPFPSPSQGS PSAAPPSPPP 60 PPPPVVVSPC AACKILRRRC VEKCVLAPYF PPTDPLKFTI AHRVFGASNI IKFLQELPES 120 QRADAVSSMV YEANARIRDP VYGCAGAICQ LQKQVSELQA QLAKAQAEVV NMQCQQANLV 180 ALICMEMSQS QEQHVLQPQP HVDMSCFIED NSFGTAWEPL WT*
|
Expression --
Description ? help
Back to Top |
Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed in young shoots, roots, stems, leaves and flowers. {ECO:0000269|PubMed:12068116}. |