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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.20G172800.1.p |
Common Name | GLYMA_20G172800, LOC100809161 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
ERF |
Protein Properties |
Length: 143aa MW: 15961.3 Da PI: 7.9133 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.20G172800.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 47.9 | 3.4e-15 | 24 | 66 | 3 | 49 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaa 49
y GVr ++ +gr++AeIr p++ + r +lg+f+taeeAa a++
Glyma.20G172800.1.p 24 YLGVRKRP-WGRYAAEIRNPYT---KERRWLGTFDTAEEAAIAYDLS 66
77******.**********865...5999***************986 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 143 aa
Download sequence Send
to blast |
MENLPPLMCK NLIRKRTSRR STMYLGVRKR PWGRYAAEIR NPYTKERRWL GTFDTAEEAA 60 IAYDLSSIKI CGINARTNFH YPFVSLPPPP MSLPPPPPPP TPELDPSVEV CPEMNAAYDG 120 DDESLVIASI LQSFSNTGNC SF*
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Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP011810 | 1e-179 | AP011810.1 Glycine max DNA, BAC clone: MiB039C03, complete sequence. |
GenBank | AP011813 | 1e-179 | AP011813.1 Glycine max DNA, BAC clone: MiB319A04, complete sequence. |