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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.20G166600.1.p |
Common Name | GLYMA_20G166600, LOC100817001 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
Trihelix |
Protein Properties |
Length: 645aa MW: 71720.9 Da PI: 5.338 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.20G166600.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 97 | 1.7e-30 | 65 | 148 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
rW++qe+laL+++r++m+ ++r+++ k+plWeevs+km+e g++rs+k+Ckek+en+ k++k++keg++++ ++ +t+++fdql+
Glyma.20G166600.1.p 65 RWPRQETLALLRIRSDMDVAFRDASVKGPLWEEVSRKMAELGYHRSSKKCKEKFENVYKYHKRTKEGRSGK--QDGKTYRFFDQLQ 148
8********************************************************************95..67778******98 PP
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2 | trihelix | 106.2 | 2.3e-33 | 459 | 544 | 1 | 87 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87
rW+k ev+aLi++r++m+e+++++ k+plWee+s+ m++ g++r++k+Ckekwen+nk++kk+ke++k+r +e+s+tcpyf+ql+a
Glyma.20G166600.1.p 459 RWPKVEVQALIKLRTSMDEKYQENGPKGPLWEEISASMKKLGYNRNAKRCKEKWENINKYFKKVKESNKRR-PEDSKTCPYFHQLDA 544
8********************************************************************97.99***********85 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 645 aa
Download sequence Send
to blast |
MLGDSALLGG GGGEGGASAD VVAATATHDA TTTTTTGGGG GGSNNSGDDE RGRIEEGERS 60 FGGNRWPRQE TLALLRIRSD MDVAFRDASV KGPLWEEVSR KMAELGYHRS SKKCKEKFEN 120 VYKYHKRTKE GRSGKQDGKT YRFFDQLQAL ENHSPTPHSP NPSSKPLQSA PSRVVATTTA 180 SSMSLPIPTP TTTVPMQPIL SNTIPTSSVP NITVPSTTIL PITIPQPILT TPSINLTIPS 240 YPPSNPTNFP PPSNPTPPLS FPTDTFSNST SSSSTSSDET LERRRKRKRK WKDFFERLMK 300 EVIEKQEELQ KKFLEAIEKR EHDRIAREEA WRVQEMQRIN REREILAQER SIAAAKDAAV 360 MSFLQKIAEQ QNLGQALTNI NLVQPQPQLQ PQPPVQQQVT PPNIVPAPMQ QPLPVIVTQP 420 VVLPVVSQVT NMEIMKADNN NNNNNNNNCE NFLPPSSSRW PKVEVQALIK LRTSMDEKYQ 480 ENGPKGPLWE EISASMKKLG YNRNAKRCKE KWENINKYFK KVKESNKRRP EDSKTCPYFH 540 QLDALYRQKH KAEESTAAAK AESAVAPLMV QPEQQWPPQQ QDDRDITMED MENEDDEYEE 600 EREGEEEEEE DEEDEEGGGG NYEIVANKTS GGGGAAASVG ASTE*
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 283 | 288 | RRKRKR |
2 | 283 | 289 | RRKRKRK |
3 | 284 | 289 | RKRKRK |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that binds specific DNA sequence. {ECO:0000250}. |