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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.20G156800.1.p |
Common Name | GLYMA_20G156800, LOC100780987 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
HSF |
Protein Properties |
Length: 301aa MW: 33295.6 Da PI: 8.7091 |
Description |
HSF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.20G156800.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HSF_DNA-bind | 116.1 | 2.2e-36 | 24 | 114 | 2 | 101 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXX CS
HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkk 91
Fl+k+y++++d++++++isw+++g+sf+v++++ fak++LpkyFkh+nf+SFvRQLn+YgF+kv ++ weF++++F++g+k
Glyma.20G156800.1.p 24 FLTKTYQLVDDHTIDDVISWNDSGSSFIVWNTTAFAKDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDR---------WEFSNEYFRRGEK 104
9*****************************************************************99.........************* PP
XXXXXXXXXX CS
HSF_DNA-bind 92 ellekikrkk 101
+ll++i+r+k
Glyma.20G156800.1.p 105 RLLCEIQRRK 114
********97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 301 aa
Download sequence Send
to blast |
MAPPLEHNGV STSGDSQRSI PTPFLTKTYQ LVDDHTIDDV ISWNDSGSSF IVWNTTAFAK 60 DLLPKYFKHN NFSSFVRQLN TYGFRKVVPD RWEFSNEYFR RGEKRLLCEI QRRKILSASP 120 PPAGATATVA VPSPLPLSAI PTAKPIVSPS NSAEEQVLSS NSSPARAPVE LLDENERLRK 180 ENILLTKELV KMRSLCNNIF NLMSNYANAQ ADGSSAAAAK RCSGEDAVEE MNPKLFGVAI 240 GKKRAREEEG HGAKYDTALS LHQPFHADVK SEALDLPGRG ENKKTPWLNQ CHRANQRVCN 300 *
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional regulator that specifically binds DNA sequence 5'-AGAAnnTTCT-3' known as heat shock promoter elements (HSE). |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC235230 | 0.0 | AC235230.1 Glycine max strain Williams 82 clone GM_WBb0026I18, complete sequence. |