PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja

Family

G2-like

Protein Properties

Length: 304aa MW: 33825.6 Da PI: 6.8254

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Glyma.20G108600.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	104.2	8e-33	19	72	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtpeLH++Fv+a+++LGG++kAtPk +l+lm+vkgLt++hvkSHLQ+YR+ Glyma.20G108600.1.p 19 PRLRWTPELHRCFVHAIDSLGGHHKATPKLVLQLMDVKGLTISHVKSHLQMYRS 72 8****************************************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	1.9E-31	15	74	IPR009057	Homeodomain-like
PROSITE profile	PS51294	10.971	15	75	IPR017930	Myb domain
SuperFamily	SSF46689	1.79E-15	17	72	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	2.1E-23	19	72	IPR006447	Myb domain, plants
Pfam	PF00249	1.0E-7	20	71	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 304 aa Download sequence Send to blast
MGSCGREGSV RQYVRSKVPR LRWTPELHRC FVHAIDSLGG HHKATPKLVL QLMDVKGLTI 60 SHVKSHLQMY RSMRGDLGRQ GRTSSQHRNQ SFEEHDDGCV DEGNDVGVEY SCSKPMGRES 120 DSFFGHSNLP PKRARIETRS SISESLQCSQ RLCDAVQNPY CFYDYLQQKK PMADEHKEFS 180 TWQQAQPHSL LFPEFPNHTS FNSPNQQSDF LQVTKLNEGK STSQPSNVLV NTTTETAIAE 240 VEDELSLSLT LPNPSPQSSG SEISEAISSC PGFGNNYKDC SSSSTHTLKE RINLDLSLAL 300 CGN*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	4e-20	20	74	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	4e-20	20	74	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A	3e-20	20	74	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	3e-20	20	74	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	3e-20	20	74	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	3e-20	20	74	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	4e-20	20	74	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	4e-20	20	74	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	4e-20	20	74	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	4e-20	20	74	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	4e-20	20	74	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	4e-20	20	74	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
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Expression -- UniGene ? help Back to Top
UniGene ID	E-value	Expressed in
Gma.4076	0.0	leaf\| root

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Glyma.20G108600.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	BT098225	0.0	BT098225.1 Soybean clone JCVI-FLGm-16F9 unknown mRNA.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_014628351.1	0.0	putative Myb family transcription factor At1g14600
TrEMBL	I1NFA5	0.0	I1NFA5_SOYBN; Uncharacterized protein
STRING	GLYMA20G24290.1	0.0	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF5539	33	53
Representative plant	OGRP285	15	123

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G14600.1	6e-36	G2-like family protein

Link Out ? help Back to Top
Phytozome	Glyma.20G108600.1.p
Entrez Gene	100796733