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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.20G108000.1.p |
Common Name | GLYMA_20G108000 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
B3 |
Protein Properties |
Length: 455aa MW: 53298 Da PI: 9.2111 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.20G108000.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 35.8 | 1.4e-11 | 22 | 108 | 3 | 96 |
EE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
B3 3 kvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90
k + +d+ ++g l++p++f++++ g++ + ++l ++g +W+vk +k + ++l + WkeF++ L++ +vFk++g+s+f
Glyma.20G108000.1.p 22 KR-IEEDAIRNGELRIPRSFVNKCweGMS--N--PVVLLLRNGAEWKVKW--KKLDVDVWLIDDWKEFADFCCLDQDHLLVFKYMGKSRF 104
43.4899*****************85333..3..49999999********..999999****************************9999 PP
..EEEE CS
B3 91 elvvkv 96
v +
Glyma.20G108000.1.p 105 --QVVI 108
..5555 PP
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2 | B3 | 45.8 | 1.1e-14 | 248 | 335 | 9 | 98 |
HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
B3 9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
++ +++ l +p +f++e ++k+ + + l ++ r W vk+ + +sg+++l+ GW +Fvk+n+Lk g ++vF+ +++ + +++v +fr
Glyma.20G108000.1.p 248 SYIERSVLFMPGNFITEDQQKE--DDHVFLWISNERAWHVKFYLSHSSGQILLSIGWMDFVKDNNLKIGNVCVFEQIKKPGISFRVVIFR 335
4455667999*****9997664..44799999999*******88*******************************888888888888887 PP
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3 | B3 | 47.7 | 2.8e-15 | 371 | 446 | 12 | 97 |
HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
B3 12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97
+++ + +pkkf+++h++++++ ++tl+ rsW+v+l + ++ r +t+GW+eF ++ +L++gD++ F+l+++++f v+ v+
Glyma.20G108000.1.p 371 QLCHMNVPKKFIKNHDIDNTK--EVTLQV-GKRSWNVTL--DCYG-R--FTSGWSEFMSQCDLEAGDVCYFELIDKKKF--VFEVR 446
567899*********999655..677655.77*******..6665.4..89***********************98998..55554 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 455 aa
Download sequence Send
to blast |
MGWAFRLHFF VWPSTSDIHF FKRIEEDAIR NGELRIPRSF VNKCWEGMSN PVVLLLRNGA 60 EWKVKWKKLD VDVWLIDDWK EFADFCCLDQ DHLLVFKYMG KSRFQVVIFY QNGLEMQYPL 120 MEETIDGNSL CQPKRAKSPL PFSSSIKKVK TNPRKEPSSY PGHDHDVKTE PAQSQRRKVE 180 LSKKFHADDL DDAKPKKRGG RRRRIMCSNS RAIKRDELLQ DTESSTALER AKAFRTDNPS 240 FIRAMGKSYI ERSVLFMPGN FITEDQQKED DHVFLWISNE RAWHVKFYLS HSSGQILLSI 300 GWMDFVKDNN LKIGNVCVFE QIKKPGISFR VVIFRDPEES SPFKFPDSES RRFNNNKVSE 360 NHFTISIKPS QLCHMNVPKK FIKNHDIDNT KEVTLQVGKR SWNVTLDCYG RFTSGWSEFM 420 SQCDLEAGDV CYFELIDKKK FVFEVRFKRC ISID*
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