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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Glyma.19G262700.1.p |
| Common Name | GLYMA_19G262700, LOC100810376 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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| Family |
ERF |
| Protein Properties |
Length: 300aa MW: 33329.1 Da PI: 5.8476 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.19G262700.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 61.4 | 2e-19 | 55 | 104 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+y+G+r+++ +g+W+AeIrdp++ r++lg+f taeeAa+a++a +++++g
Glyma.19G262700.1.p 55 QYRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTAEEAARAYDAEARRIRG 104
69*******.**********954...4************************998 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 300 aa
Download sequence Send
to blast |
MCGGAIISDF ILLFETSNIL RVFWENWLKN GSTTAKSVAF QVRAEKFANR KRKNQYRGIR 60
QRPWGKWAAE IRDPRKGVRV WLGTFNTAEE AARAYDAEAR RIRGKKAKVN FPEEAPGTSV 120
KRSKVNPQEN LSHKFGAGNN HMDLVEQKPL VNQYANMASF PGSGNGLTSL PSSDDVTLYF 180
SSDQGSNSFG WSEQGPKTPE ISSMLSAPLD CESHFVQNAN QQPNSQNVVS MEDDSAKRLS 240
EERVDIESEL KFFQMAYLEG SWGDTSLESL LSGDTTQDGG NLMNLWSFDD IPSMSSGVF*
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1gcc_A | 1e-21 | 55 | 112 | 2 | 60 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 |
| 5wx9_A | 2e-21 | 55 | 114 | 14 | 74 | Ethylene-responsive transcription factor ERF096 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcriptional activator that may be involved in defense signaling pathway. Binds in vitro to the DNA sequence 5'-AGCCGCC-3' of the GCC-box element found in pathogenesis-related (PR) gene promoters. The transcriptional activation is enhanced in vitro by the presence of MPK12/BWMK1. {ECO:0000269|PubMed:12913152}. |
| Publications
? help Back to Top |
- Kim CY, et al.
Identification of rice blast fungal elicitor-responsive genes by differential display analysis.
Mol. Plant Microbe Interact., 2000. 13(4): p. 470-4
[PMID:10755311] - Koo SC, et al.
OsBWMK1 mediates SA-dependent defense responses by activating the transcription factor OsWRKY33.
Biochem. Biophys. Res. Commun., 2009. 387(2): p. 365-70
[PMID:19607808] - Iwamoto M,Takano M
Phytochrome-regulated EBL1 contributes to ACO1 upregulation in rice.
Biotechnol. Lett., 2011. 33(1): p. 173-8
[PMID:20872166] - Serra TS, et al.
OsRMC, a negative regulator of salt stress response in rice, is regulated by two AP2/ERF transcription factors.
Plant Mol. Biol., 2013. 82(4-5): p. 439-55
[PMID:23703395] - Jisha V, et al.
Overexpression of an AP2/ERF Type Transcription Factor OsEREBP1 Confers Biotic and Abiotic Stress Tolerance in Rice.
PLoS ONE, 2015. 10(6): p. e0127831
[PMID:26035591] - Lourenço TF, et al.
The Rice E3-Ubiquitin Ligase HIGH EXPRESSION OF OSMOTICALLY RESPONSIVE GENE1 Modulates the Expression of ROOT MEANDER CURLING, a Gene Involved in Root Mechanosensing, through the Interaction with Two ETHYLENE-RESPONSE FACTOR Transcription Factors.
Plant Physiol., 2015. 169(3): p. 2275-87
[PMID:26381316]
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