 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Glyma.19G228300.1.p |
| Common Name | GLYMA_19G228300, LOC100803095 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
|
| Family |
TALE |
| Protein Properties |
Length: 312aa MW: 35503.1 Da PI: 5.6875 |
| Description |
TALE family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.19G228300.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 27.3 | 6e-09 | 249 | 282 | 22 | 55 |
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS
Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRake 55
+yp++ee+ +L++ +gL+++q+ +WF N+R ++
Glyma.19G228300.1.p 249 WPYPTEEEKVKLSEITGLDQKQINNWFINQRKRH 282
58*****************************885 PP
|
| 2 | ELK | 30 | 1.2e-10 | 202 | 223 | 1 | 22 |
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22
+LK++LlrKYsg+ ++L++EF+
Glyma.19G228300.1.p 202 RLKEMLLRKYSGHFSGLRKEFL 223
69*******************8 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 312 aa
Download sequence Send
to blast |
MEAVYRLKPL LDVVRVGNAT TSEMRLESTA NCYLQLEAPQ PQENNNVTDS SSDMSDRIIK 60
IQIANHPLYP DLLSAYIECQ KVGAPPELAC LLEEIGRESH RMNARREIGE GPELDHFMET 120
FCQVLHRYKE ELSRPFNEAT LFLGDMESQL SNLCNETLTK SSDNNNRSDE VASGASEEEL 180
SCGEMEAFED NVSSVTCPSD QRLKEMLLRK YSGHFSGLRK EFLKRRKKGK LPKDARMALM 240
GWWNTHHRWP YPTEEEKVKL SEITGLDQKQ INNWFINQRK RHWKPTEDMR FAVMDGLRGG 300
GGGGIGGPML F*
|
| Expression --
Description ? help
Back to Top |
| Source |
Description |
| Uniprot | DEVELOPMENTAL STAGE: Highly expressed in the early globular stage embryo before 2 days after pollination (DAP), but not in the endosperm. At 3 and 4 DAP, expression is restricted to the region around or just below the center of the ventral side of the embryo, where the shoot apex subsequently arises. During the transition to the shoot apex differentiation stage, expression is divided between the upper and basal regions of the shoot area, and the notch between the first leaf primordium and epiblast, respectively. When the first leaf primordia is evident, expression is localized to the notches between the shoot apical meristem (SAM) and the first leaf primordium and the putative second leaf primordium. Expressed uniformly in the inflorescence meristem, but after the transition from inflorescence to the floral phase, located specifically in the notches between the floral meristem and glume primordia. At later stages of flower development, uniformly expressed throughout the corpus of the meristem, and in the notches between glume primordia, but less well defined than in the previous stage. {ECO:0000269|PubMed:10488233}. |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor that may be involved in shoot formation during early embryogenesis. {ECO:0000269|PubMed:10488233}. |
