 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Glyma.19G224600.1.p |
Common Name | GLYMA_19G224600, LOC100788976 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
|
Family |
MYB |
Protein Properties |
Length: 435aa MW: 48445.7 Da PI: 7.4036 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.19G224600.1.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 58.1 | 1.9e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g W++eEde+l+++++++G g+W+++++ g+ R++k+c++rw +yl
Glyma.19G224600.1.p 14 KGLWSPEEDEKLLNYITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYL 61
678*******************************************97 PP
|
2 | Myb_DNA-binding | 42.2 | 1.9e-13 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
rg+++++E+ ++++++ lG++ W+ Ia+ ++ gRt++++k+ w++
Glyma.19G224600.1.p 67 RGAFSQQEENSIIELHAVLGNR-WSQIAAQLP-GRTDNEIKNLWNS 110
89********************.*********.***********97 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 435 aa
Download sequence Send
to blast |
MGRHSCCYKQ KLRKGLWSPE EDEKLLNYIT KHGHGCWSSV PKLAGLQRCG KSCRLRWINY 60 LRPDLKRGAF SQQEENSIIE LHAVLGNRWS QIAAQLPGRT DNEIKNLWNS CLKKKLRQRG 120 IDPNTHQPLS EVENDKDKPL TADKSNQKAS NEVSLIEPPK PKPISTTSMP MDRYPLEVSS 180 TFKISGGNNN NNNSNSTLDR FDSSITSSDM MGMGYFPFQH LNYGSNMGLT TTPNNTPLCF 240 MPSSTSSQMM SELNSTMLHS MFPTHVKPTV SLHSNNNNNP SSISSDGVQN WETSTFSNNN 300 NASKSNGSSS CSIQLQSGST NFLDHSSTIT WGLQAESATK ADKDAHVVVP LQSSEQEDIK 360 WSEYLNNTPF SLGTMSVQHQ TTNSLYSSDE VKPETTGFIA DESSTSWHHS QHFQPSEIYT 420 KDLQRFSVAF GQTL*
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AC235180 | 0.0 | AC235180.1 Glycine max strain Williams 82 clone GM_WBb0008A05, complete sequence. |