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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.19G180300.1.p |
Common Name | GLYMA_19G180300, LOC100788799 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
NAC |
Protein Properties |
Length: 338aa MW: 38609.6 Da PI: 6.5257 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.19G180300.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 167.3 | 5e-52 | 13 | 140 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90
lppGfrFhP+deel+v+yL++kv++++l++ ++i+e+d+yk++Pw+Lp+k+ +e+ewyfF++rd+ky++g r+nra++sgyWkatg+dk
Glyma.19G180300.1.p 13 LPPGFRFHPSDEELIVHYLRNKVTSSPLPA-SFIAEIDLYKYNPWELPSKALFGEDEWYFFTPRDRKYPNGVRPNRAAASGYWKATGTDK 101
79****************************.89***************87778999********************************** PP
NAM 91 evlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
+++++ + + + +kk Lvfykgr pkg+ktdW+mheyrl
Glyma.19G180300.1.p 102 PIFTScGMKSIAVKKALVFYKGRPPKGSKTDWIMHEYRL 140
****977788***************************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 338 aa
Download sequence Send
to blast |
MFMDKDANSE IQLPPGFRFH PSDEELIVHY LRNKVTSSPL PASFIAEIDL YKYNPWELPS 60 KALFGEDEWY FFTPRDRKYP NGVRPNRAAA SGYWKATGTD KPIFTSCGMK SIAVKKALVF 120 YKGRPPKGSK TDWIMHEYRL HDSTISNSKQ GGTMRLDEWV LCRVRQKTIS PRSLWEDSNE 180 PIYEPTSYFQ QMSEKSNPEP VKNSLHSEYP MLPYILASKS ALPNSIDMAS SSSFGCNDDV 240 KAYASLHDGN LNNIIIGAQF IAPVAEDLFN PLKRRNIEEN ELDLYAPLNK KLNEEVDVGK 300 QILEKDVNKG YNFNNFDQWT SIIQPQEFNS LAFTKYA*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC235460 | 1e-133 | AC235460.1 Glycine max strain Williams 82 clone GM_WBb0169H15, complete sequence. |