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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Glyma.19G096400.1.p |
| Common Name | GLYMA_19G096400, LOC100805039 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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| Family |
GRAS |
| Protein Properties |
Length: 682aa MW: 75382.7 Da PI: 6.1565 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.19G096400.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 430.3 | 1.5e-131 | 319 | 680 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPi 90
lv+lLl+cAeav++++ la+++L +l+ ++p gd+mqR+a +ft L+arl++ + + a p+++ +++ns e+l+++++ ++++P+
Glyma.19G096400.1.p 319 LVHLLLACAEAVAKEEYMLARRYLHHLNRVVTPLGDSMQRVAVCFTDSLSARLNS-TLTPKPATPSKPLTPSNSLEVLKIYQIVYQACPY 407
68****************************************************9.44444566888999999***************** PP
GRAS 91 lkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnv 180
+kf+h+taNqaI eave eervH+iD+di qG QWpa++qaLa+Rp+g+p lRiTgvg+ ++++etg+ L+++A++l++pfef++
Glyma.19G096400.1.p 408 VKFAHFTANQAIFEAVEIEERVHVIDLDILQGYQWPAFMQALAARPAGAPFLRITGVGP----LLDAVRETGRCLTELAHSLRIPFEFHA 493
***********************************************************....99************************* PP
GRAS 181 lvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfds 270
v ++ledl++++L+ + gEalaVn v +lhr++ ++ ++L ++++ P +v++veqea+hn++ Fl rfleal+yysa+fds
Glyma.19G096400.1.p 494 -VGEQLEDLKPHMLNRRVGEALAVNAVNHLHRVP------GNHLGNLLTMLRDQAPSIVTLVEQEASHNGPYFLGRFLEALHYYSAIFDS 576
.7*******************************9......444557******************************************** PP
GRAS 271 leaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvl 360
l+a++p+es +r+kvE+ ++++ei+n+vacegaer+erhe+lekWr+ +e GFk v+ls +a++q k ll ++ +gyr+ e++g+l+l
Glyma.19G096400.1.p 577 LDATFPAESAQRAKVEQYIFAPEIRNIVACEGAERFERHERLEKWRKIMEGKGFKGVALSPNAVTQSKILLGLYSCEGYRLTEDKGCLLL 666
****************************************************************************************** PP
GRAS 361 gWkdrpLvsvSaWr 374
gW+dr+++++SaWr
Glyma.19G096400.1.p 667 GWQDRAIIAASAWR 680
*************8 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 682 aa
Download sequence Send
to blast |
MMNSLCGSSL SLKSENNNSR TKLQQPTSSN DSVLQSKKNN ATQSSGDLDQ TSLTPPSLNL 60
PSLKFDLDGD VEVQSPDSSM WESFFADHID GDFMISSPVR TPQAASSYNC NYNYAQGMQG 120
QSLSGCSPPR FSSSQIGAFN SSSSLNKGKG LSPLHRVFNS PNNQYMQHVE NLSLPAIEEF 180
LEDYQTKVSS SDHNITSSSE CFDLSSHQIP SSILDGLALH NSSRYHRGSV VDEESTVHGG 240
GGGGGGSSQL SQESDIYHQM GSMASASLSQ ALQQERYQEK QQKQQAQQLQ QQQRQHQQEN 300
LMVPIPIEIE QEQDSGLQLV HLLLACAEAV AKEEYMLARR YLHHLNRVVT PLGDSMQRVA 360
VCFTDSLSAR LNSTLTPKPA TPSKPLTPSN SLEVLKIYQI VYQACPYVKF AHFTANQAIF 420
EAVEIEERVH VIDLDILQGY QWPAFMQALA ARPAGAPFLR ITGVGPLLDA VRETGRCLTE 480
LAHSLRIPFE FHAVGEQLED LKPHMLNRRV GEALAVNAVN HLHRVPGNHL GNLLTMLRDQ 540
APSIVTLVEQ EASHNGPYFL GRFLEALHYY SAIFDSLDAT FPAESAQRAK VEQYIFAPEI 600
RNIVACEGAE RFERHERLEK WRKIMEGKGF KGVALSPNAV TQSKILLGLY SCEGYRLTED 660
KGCLLLGWQD RAIIAASAWR C*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor that functions in mycorrhizal specific signaling (PubMed:23122845). Required for Myc factor signaling from mycorrhizal fungi, but has no function in Nod factor signaling from rhizobial bacteria (PubMed:23122845). Regulates the expression of RAM2, a glycerol-3-phosphate acyl transferase that promotes cutin biosynthesis to enhance mycorrhizal hyphopodia formation (PubMed:23122845). {ECO:0000269|PubMed:23122845}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced in roots during colonization by arbuscular mycorrhizal fungi. {ECO:0000269|PubMed:23122845}. |
