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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Glyma.19G095600.1.p |
| Common Name | GLYMA_19G095600 |
| Organism |
|
| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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| Family |
FAR1 |
| Protein Properties |
Length: 176aa MW: 20743.1 Da PI: 10.1582 |
| Description |
FAR1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.19G095600.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | FAR1 | 30.3 | 1.4e-09 | 5 | 94 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerr.traetrtgCkaklkvkkek.dgkwevtkleleHnHela 90
fY+ +A+ G rk k k+k+ + + ++ C ++gkre++ ++ek++r r +tr+gC+ + +v+ + +v+ +++ H+Hel
Glyma.19G095600.1.p 5 FYCWFARGKGSGARKGKILKNKKGK-KFCDKLFCHRKGKREDRGLTNEKHKRyIRRKTRCGCRTECRVHIGInSRLRYVSYIHNGHSHELL 94
9******************996655.7888999**********98855554437999*****98888888775777889**********96 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 176 aa
Download sequence Send
to blast |
MGYCFYCWFA RGKGSGARKG KILKNKKGKK FCDKLFCHRK GKREDRGLTN EKHKRYIRRK 60
TRCGCRTECR VHIGINSRLR YVSYIHNGHS HELLNDEECR MLPKNRLQHL FWCDWIIQVD 120
YSVFGDVLAF DATYGKNKYD LLVILFGVNH HNHRTVFGVL VVANKIEETY VRLLE*
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| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 51 | 61 | KHKRYIRRKTR |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AC235044 | 1e-173 | AC235044.1 Glycine max strain Williams 82 clone GM_WBb0005G15, complete sequence. |
| GenBank | AC235118 | 1e-173 | AC235118.1 Glycine max strain Williams 82 clone GM_WBa0027P10, complete sequence. |
| GenBank | AC235218 | 1e-173 | AC235218.1 Glycine max strain Williams 82 clone GM_WBb0021C10, complete sequence. |
| GenBank | AC235853 | 1e-173 | AC235853.2 Glycine max clone GM_WBb0081I20, complete sequence. |
| GenBank | AC236296 | 1e-173 | AC236296.1 Glycine max strain Williams 82 clone GM_WBb0094F23, complete sequence. |
