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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Glyma.19G020600.1.p |
| Common Name | GLYMA_19G020600 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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| Family |
WRKY |
| Protein Properties |
Length: 490aa MW: 53837.4 Da PI: 6.394 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.19G020600.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 95 | 5.4e-30 | 203 | 261 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
+Dg++WrKYGqK kg+++pr+YYrCt a Cpv+k+v+r+a+d +++++tYeg+Hnh+
Glyma.19G020600.1.p 203 HDGCQWRKYGQKIAKGNPCPRAYYRCTLApACPVRKQVQRCADDMSILITTYEGTHNHP 261
7**************************999****************************7 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0006952 | Biological Process | defense response |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 490 aa
Download sequence Send
to blast |
MEAMLKLSSL CGQEIDDKRD TSICSEEDLC IEKGSKEDKL ESAKAEMSKV KEENERLKMM 60
IERVGKNYHS LQLRFFDILH RETSNKGVED SAVSLDEVEE PKLVSLCLGT SPWEHKKDGI 120
ICNSSKHKEN EDLEASLTLG LDCKGVSSKE QVSDMNTSEE KEEDSTNKLV RTKDGGDEIS 180
EITPPAKRAR VCVRARCDSP VMHDGCQWRK YGQKIAKGNP CPRAYYRCTL APACPVRKQV 240
QRCADDMSIL ITTYEGTHNH PIPASATAMA STTSAAVSML LSGSSTSQPT DHSFAYHANS 300
PTLFSGVNFS LLDQPRANQV LLPTPSSHLL PTITLDLTST PSYSLNQGNC LPSNFASTPR 360
FPPLSLNFWS PESNIPLSFW GKGIPNNGTI PIDKTHIKPF NIGNQFQEHF YQHYFKNQTP 420
FREALAETLT KAISTDTSFR SAIAAAVSSI RGQGSSSENK GDGEVLGSGL SLKLGEHPQL 480
ASSNSLNKNE
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1wj2_A | 9e-21 | 193 | 264 | 8 | 78 | Probable WRKY transcription factor 4 |
| 2ayd_A | 8e-21 | 189 | 263 | 1 | 74 | WRKY transcription factor 1 |
| 2lex_A | 9e-21 | 193 | 264 | 8 | 78 | Probable WRKY transcription factor 4 |
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