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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Glyma.19G002900.2.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
|
| Family |
NAC |
| Protein Properties |
Length: 364aa MW: 40699.3 Da PI: 5.9921 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.19G002900.2.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 99.3 | 5.7e-31 | 30 | 171 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra.... 77
p+G++F+P+d el+ e+L++k+ + + +++i++++ i++++P++Lp +k++ ++++fF+k++++yatg+rk+r+
Glyma.19G002900.2.p 30 PVGVKFDPSDVELL-EHLAAKCCIGNrephmfI--HQFIPTLEgeqgICYTHPQNLP-GAKTDGSSVHFFHKTANAYATGRRKRRKihhq 115
89************.888888665554666431..333444322334**********.55678899*******************86777 PP
NAM 78 ....tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
++ +W++tg++k+v++ +g ++g kk++v+y +++ k+ kt+Wvmh+y+l
Glyma.19G002900.2.p 116 dgltEEHVRWHKTGRTKAVTE-DGVHKGFKKIMVLYirSKKGTKPYKTNWVMHQYHL 171
777444889***********9.999***********7645666777*********98 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 364 aa
Download sequence Send
to blast |
MKDCGTYSEC PKCHYHIDNS NVSHEWPGFP VGVKFDPSDV ELLEHLAAKC CIGNREPHMF 60
IHQFIPTLEG EQGICYTHPQ NLPGAKTDGS SVHFFHKTAN AYATGRRKRR KIHHQDGLTE 120
EHVRWHKTGR TKAVTEDGVH KGFKKIMVLY IRSKKGTKPY KTNWVMHQYH LGSEVEKDGE 180
YVVSKIFYQQ HKQNEKNEEN TMVEDSNVAA QAGPRTPKPN PPTRPCTAKC DDNFDENELL 240
PFIQDARPIP GESHAPPSNV QDEDPAWLAG ESQADCDFDG LEDILLCKEI LQSSALLNHS 300
GLTSTFNGDA KANKLVAPGN NNDYGSYGVS VLDTLELDTP PDFDLSNLQF GSQDSTLQWI 360
DTP*
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015643 | 1e-168 | AP015643.1 Vigna angularis var. angularis DNA, scaffold: Scaffold_0599, complete sequence, cultivar: Shumari. |
