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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.18G281800.1.p |
Common Name | GLYMA_18G281800, LOC100788594 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
Trihelix |
Protein Properties |
Length: 330aa MW: 35951.8 Da PI: 5.195 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.18G281800.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 86.4 | 3.3e-27 | 39 | 131 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgk.......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfd 83
rWt+qe+l+Li+++++ e+r+r g+ + +p+W+ vs++++++g++r+p+qC+++w+nl+++ykkike+e++ ++e++s + + +
Glyma.18G281800.1.p 39 RWTRQEILVLIQGKSDAESRFRPGRgsgsafgSGEPKWALVSSYCKKHGVNREPVQCRKRWSNLAGDYKKIKEWESQVRDEAESFWLMRN 128
8*********************87556777779*********************************************999999999888 PP
trihelix 84 qle 86
+l+
Glyma.18G281800.1.p 129 DLR 131
876 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 330 aa
Download sequence Send
to blast |
MALDQPSNPN AVDGAGNGAT PCSAADGGDD GRPAARLPRW TRQEILVLIQ GKSDAESRFR 60 PGRGSGSAFG SGEPKWALVS SYCKKHGVNR EPVQCRKRWS NLAGDYKKIK EWESQVRDEA 120 ESFWLMRNDL RRERKLPGYF DREVYNILDS PSSTAAAAAA ETPVAVAEAA SAGDEEVHLY 180 DSNRRVGSED GLFSDSEKDE VLLLAAAKDV PAPVPLSEKQ YQPHLHGCEG EGNPQGTTNG 240 KRATPNPEMG STSQGERKRK RLATDGEEET LQSQLIDVLE KNGKMLHDQL EAQNLNFQLD 300 RQQQKDTASN IVAVLDKLAD ALGRIADKL*
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional repressor that binds DNA and plays a negative role in regulating microbe-associated molecular patterns-(MAMPs, e.g. flg22, elf18, chitin, and LPS) triggered immunity (PTI) by negatively regulating immune gene expression. {ECO:0000269|PubMed:25770109}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015037 | 1e-164 | AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari. |